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Protein Overview: gi|12321343, gi|...

General Information:
Name(s) found: gi|25404159 [NCBI NR]
gi|15223636 [NCBI NR]
gi|12321343 [NCBI NR]
Description(s) found:
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  • pir||G96610 probable disease resistance protein RPP1-WsA [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15223636|ref|NP_176078.1| disease resistance protein (NBS-LRR class), putative [Arabidopsis thaliana] [NCBI NR]
  • gi|12321343|gb|AAG50739.1|AC079733_7 disease resistance protein RPP1-WsA, putative [Arabidopsis thaliana] [NCBI NR]
  • (Q9FVT7) Disease resistance protein RPP1-WsA [athaliana3702.FASTAC.txt]
  • disease resistance protein RPP1-WsA, putative [Arabidopsis thaliana]gi|25404159|pir||G96610 probable disease resistance protein RPP1-WsA [imported] - Arabidopsis thalianagi|15223636|ref|NP_176078.1| disease resistance protein (NBS-LRR class), putative [ [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Disease resistance protein (NBS-LRR class) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | disease resistance protein (NBS-LRR class), putative | chr1:21354956-21357647 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • disease resistance protein RPP1-WsA, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 709 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: defense response [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPWSATVSG AVNISNTSNY TLSDYILTRR MYKLIFFFVR VDETDMIENI AAYISSRFQN  60
   61 SAVIEDIKGS YPKPRFDEDL QIFCKYAFNQ KTPEDGFDEL AREITYHVGE LPLGLKVIGS 120
  121 HFRGLSKEQW PMEVSRLRTY RNGDIERILK FSYDALCDED KDLFLHIACF FNMEKITKVK 180
  181 ELFGHRFKDL RQSLHILEMK SLISIEHTDL EDSEYYESIN MRNLLVQLGQ EIVRKESVLE 240
  241 PGQRRFLIDY KDICAVVSGH TTITGSVVGI DSKNWLSITE KSFKGMSNLQ FLRVKNDLYH 300
  301 PNIISSPGPL TFISPKLRLL DWSCFPMTSL RFINNLEFLV ELRMCYSKLE KLWDGIQLVR 360
  361 NLKHMDLTDS RNLKELPNLS MATNLKNLNL ERCSSLVELP SSIGNATSLH DLRLFKCSSL 420
  421 VELPFSIGNL TNLWKLDLRE CSSLVSLPQL PDSIMVLNAR NCESLEKLDC SFYNPGILLN 480
  481 FVNCFNLNQE ARDLLIETST VNFVVLPGKE VPACFTYRSH GSSVSVKVNQ KLLHTSTKFK 540
  541 ACILFENEVD NETYYFDLDT LCVYTKTNKD CILLDNKGED DEVGIQKRGL VSCRIGSEWR 600
  601 FSEWYPFITD HLYIFEVEAK EVTSTELIFY FEIFDEYSKA REIKECGIIH LLEHHVDDEE 660
  661 KMDTIEKEPK SEIFKNFEVA IDISKCVKSR KRIGARTNLD AKEICETIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 11.045757 Structure of the apoptotic protease-activating factor 1 bound to ADP
    2 View Details [131..709] PSI-BLAST 13.69897 The molecular structure of toll-like receptor 3 ligand binding domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle