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Protein Overview: PRFB1_ARATH

General Information:
Name(s) found: PRFB1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|30692908|ref|NP_851096.1| HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [NCBI NR]
  • gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] [NCBI NR]
  • Peptide chain release factor PrfB1, chloroplastic OS=Arabidopsis thaliana GN=PRFB1 PE=2 SV=1 [Swiss-Prot]
  • (Q9LVY0) Putative translation releasing factor RF-2 [athaliana3702.FASTAC.txt]
  • putative translation releasing factor RF-2 [Arabidopsis thaliana]gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]gi|21536944| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Peptide chain release factor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATPRFB, HCF109 | HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor | chr5:14253313-14255204 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation releasing factor RF-2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative translation releasing factor RF-2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HCF109, ATPRFB | high chlorophyll fluorescent 109 | chr5:14236083-14237974 REVERSE LENGTH=456 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • High chlorophyll fluorescent 109 protein OS=Arabidopsis thaliana GN=HCF109 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 456 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: translational termination [IMP][ISS]
    RNA processing [IMP]
    plastid organization [IMP]
    Molecular Function: translation release factor activity [IEA][ISS]
    translation release factor activity, codon specific [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMELTVLGP LAGRSFAIAG KPKLLLLRPT NLPLLRLSLP LSLPNFSSSS RFNSPIVFAA  60
   61 QESNLSVSNE NETSEWLMQD FYTLRKDVEI ASARVEEIRA SANLQQLEQE ITNLESKATD 120
  121 TSFWDDRTKA QETLSSLNDL KDRMRLLSEF KTMVEDAETI VKLTEEMDST DVSLLEEAMG 180
  181 IIKELNKSLD KFELTQLLSG PYDKEGAVVY ITAGAGGTDA QDWADMLLRM YMRWGEKQRY 240
  241 KTKVVEMSNG EEAGIKSATL EIEGRYAYGY ISGEKGTHRI VRQSPFNSKG LRQTSFSGVE 300
  301 VMPLLPEEAV GIEIPEEDLD ISFTRAGGKG GQNVNKVETA VRITHIPTGV AVRCTEERSQ 360
  361 LANKTRALIR LKAKLMVIAE EQRATEIKEI RGDAVKAEWG QQIRNYVFHP YKLVKDVRTG 420
  421 HETSDITSVM DGDLDPFIKA YLKHKYTLAM ASAVTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..456] PSI-BLAST 125.0 70S ribosome functional complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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