YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: UPP_ARATH

General Information:
Name(s) found: UPP_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|7630010|emb|CAB88352.1| uracil phosphoribosyltransferase-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21281024|gb|AAM45046.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|15810301|gb|AAL07038.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|15232358|ref|NP_190958.1| uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative [Arabidopsis thaliana] [NCBI NR]
  • pir||T45930 uracil phosphoribosyltransferase-like protein - Arabidopsis thaliana [NCBI NR]
  • Uracil phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=UPP PE=1 SV=1 [Swiss-Prot]
  • (Q9M336) Putative uracil phosphoribosyltransferase [athaliana3702.FASTAC.txt]
  • putative uracil phosphoribosyltransferase [Arabidopsis thaliana]gi|15810301|gb|AAL07038.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana]gi|7630010|emb|CAB88352.1| uracil phosphoribosyltransferase-like protein [Arabidopsis thaliana]gi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Uracil phosphoribosyltransferase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative | chr3:19967892-19969984 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • uracil phosphoribosyltransferase-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • uracil phosphoribosyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative uracil phosphoribosyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: UPP, PYRR | uracil phosphoribosyltransferase | chr3:19956914-19959006 REVERSE LENGTH=296 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uracil phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=UPP PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    plastid [IDA]
    Biological Process: nucleoside metabolic process [ISS]
    cellular response to phosphate starvation [IEP]
    developmental process [IMP]
    Molecular Function: uracil phosphoribosyltransferase activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI  60
   61 RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ TPCPVFRNAI AELGRLLMYE 120
  121 ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG 180
  181 VSRDEKTLLP SVYLNKLPDE FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI 240
  241 CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..296] PSI-BLAST 57.522879 Uracil PRTase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • uracil phosphoribosyltransferase activity
    		•  3.97944228585882 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  3.91023158228049 bayes_pls_golite062009
  • adenine phosphoribosyltransferase activity
    		•  3.07502596276449 bayes_pls_golite062009
  • transferase activity
    		•  2.73727660668741 bayes_pls_golite062009
  • hypoxanthine phosphoribosyltransferase activity
    		•  2.67945744445872 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.53679639481311 bayes_pls_golite062009
  • catalytic activity
    		•  2.30431811394775 bayes_pls_golite062009
  • ribose phosphate diphosphokinase activity
    		•  0.947697983706416 bayes_pls_golite062009
  • diphosphotransferase activity
    		•  0.749909396904601 bayes_pls_golite062009
  • binding
    		•  0.730385736169604 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.552133387792911 bayes_pls_golite062009
  • DNA binding
    		•  0.439741935655503 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.396538943915776 bayes_pls_golite062009
  • amidophosphoribosyltransferase activity
    		•  0.360901350940423 bayes_pls_golite062009
  • purine binding
    		•  0.358545436706029 bayes_pls_golite062009
  • orotate phosphoribosyltransferase activity
    		•  0.148898393751978 bayes_pls_golite062009
  • nucleobase binding
    		•  0.0803493215714011 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle