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Protein Overview: gi|79313139, gi|...

General Information:
Name(s) found: gi|79313139 [NCBI NR]
gi|6437559 [NCBI NR]
gi|15230701 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|79313139|ref|NP_001030649.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|6437559|gb|AAF08586.1|AC011623_19 putative DnaJ protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230701|ref|NP_187285.1| DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [IEA][ISS]
    Molecular Function: heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINRDEALR AKDLAEGLMK KTDFTAARKL AMKAQKMDSS LENISRMIMV CDVHCAATEK  60
   61 LFGTEMDWYG ILQVEQIAND VIIKKQYKRL ALLLHPDKNK LPGAESAFKL IGEAQRILLD 120
  121 REKRTLHDNK RKTWRKPAAP PYKAQQMPNY HTQPHFRASV NTRNIFTELR PEIRHPFQKA 180
  181 QAQPAAFTHL KTFGTSCVFC RVRYEYDRAH VNKEVTCETC KKRFTAFEEP LQSAPQAKGP 240
  241 SQTTYCFPQQ SKFPDQRACS EPHKRPENPP TVSSSKASFP MPGSTAKHNG KRKRKNVAEC 300
  301 SESSDSESSS ESEDDVNNDT TAAQDSGSNG GEQPRRSVRS KQKVSYNENL SDDDVDLVND 360
  361 NGEGSGKNID TEREKETEEE KQTNENHSST ESIDMNGKIE VDQVETPSGA SDSEEDLSSG 420
  421 SAEKPNLINY DDPDFNDFDK LREKSCFQAG QIWAVYDEEE GMPRFYALIK KVTTPDFMLR 480
  481 YVWFEVDQDQ ENETPNLPVS VGKFVVGNIE ETNLCSIFSH FVYSTTKIRT RKFTVFPKKG 540
  541 EIWALFKNWD INCSADSVSP MKYEYEFVEI LSDHAEGATV SVGFLSKVQG FNCVFCPMPK 600
  601 DESNTCEIPP HEFCRFSHSI PSFRLTGTEG RGITKGWYEL DPAALPASVS QNLSGEEAAQ 660
  661 DRDRQSPPSG SAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 3.69897 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
    2 View Details [120..192] PSI-BLAST 22.09691 NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES
    3 View Details [193..461] PSI-BLAST 22.522879 The crystal structure of Hsp40 Ydj1
    4 View Details [462..673] MSA 2.089948 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.036672061154828 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle