| Protein: | gi|79313139, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 673 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79313139, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
462.0 | [0..5] | [661..1] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MSINRDEALR AKDLAEGLMK KTDFTAARKL AMKAQKMDSS LENISRMIMV CDVHCAATEK 60
61 LFGTEMDWYG ILQVEQIAND VIIKKQYKRL ALLLHPDKNK LPGAESAFKL IGEAQRILL
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [120-192] |
1 11 21 31 41 51
| | | | | |
1 DREKRTLHDN KRKTWRKPAA PPYKAQQMPN YHTQPHFRAS VNTRNIFTEL RPEIRHPFQK 60
61 AQAQPAAFTH LKT
|
| Detection Method: | |
| Confidence: | 22.09691 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [193-461] |
1 11 21 31 41 51
| | | | | |
1 FGTSCVFCRV RYEYDRAHVN KEVTCETCKK RFTAFEEPLQ SAPQAKGPSQ TTYCFPQQSK 60
61 FPDQRACSEP HKRPENPPTV SSSKASFPMP GSTAKHNGKR KRKNVAECSE SSDSESSSES 120
121 EDDVNNDTTA AQDSGSNGGE QPRRSVRSKQ KVSYNENLSD DDVDLVNDNG EGSGKNIDTE 180
181 REKETEEEKQ TNENHSSTES IDMNGKIEVD QVETPSGASD SEEDLSSGSA EKPNLINYDD 240
241 PDFNDFDKLR EKSCFQAGQI WAVYDEEEG
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
|
Region A: Residues: [462-673] |
1 11 21 31 41 51
| | | | | |
1 MPRFYALIKK VTTPDFMLRY VWFEVDQDQE NETPNLPVSV GKFVVGNIEE TNLCSIFSHF 60
61 VYSTTKIRTR KFTVFPKKGE IWALFKNWDI NCSADSVSPM KYEYEFVEIL SDHAEGATVS 120
121 VGFLSKVQGF NCVFCPMPKD ESNTCEIPPH EFCRFSHSIP SFRLTGTEGR GITKGWYELD 180
181 PAALPASVSQ NLSGEEAAQD RDRQSPPSGS AS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
