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Protein Overview: ERG15_ARATH

General Information:
Name(s) found: ERG15_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|3445200|gb|AAC32430.1| putative squalene epoxidase [Arabidopsis thaliana] [NCBI NR]
  • pir||D84617 probable squalene epoxidase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227757|ref|NP_179868.1| SQE2 (squalene epoxidase 2); FAD binding / oxidoreductase/ squalene monooxygenase [Arabidopsis thaliana] [NCBI NR]
  • Squalene epoxidase 2, mitochondrial OS=Arabidopsis thaliana GN=SQE2 PE=1 SV=1 [Swiss-Prot]
  • (O81000) Putative squalene epoxidase [athaliana3702.FASTAC.txt]
  • putative squalene epoxidase [Arabidopsis thaliana]gi|25412143|pir||D84617 probable squalene epoxidase [imported] - Arabidopsis thalianagi|15227757|ref|NP_179868.1| squalene monooxygenase, putative / squalene epoxidase, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Squalene monooxygenase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SQE2 | SQE2 (SQUALENE EPOXIDASE 2); oxidoreductase | chr2:9731027-9733350 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative squalene epoxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SQE2 | squalene epoxidase 2 | chr2:9723947-9726270 REVERSE LENGTH=585 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative squalene epoxidase OS=Arabidopsis thaliana GN=SQE2 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: sterol biosynthetic process [TAS]
    Molecular Function: squalene monooxygenase activity [IEA]
    FAD binding [IEA]
    oxidoreductase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPFVIRNLP RFQSTLRSSL LYTNHRPSSR FSLSTRRFTT GATYIRRWKA TAAQTLKLSA  60
   61 VNSTVMMKPA KIALDQFIAS LFTFLLLYIL RRSSNKNKKN RGLVVSQNDT VSKNLETEVD 120
  121 SGTDVIIVGA GVAGSALAHT LGKEGRRVHV IERDFSEQDR IVGELLQPGG YLKLIELGLE 180
  181 DCVKKIDAQR VLGYVLFKDG KHTKLAYPLE TFDSDVAGRS FHNGRFVQRM REKALTLSNV 240
  241 RLEQGTVTSL LEEHGTIKGV RYRTKEGNEF RSFAPLTIVC DGCFSNLRRS LCKPKVDVPS 300
  301 TFVGLVLENC ELPFANHGHV VLGDPSPILM YPISSSEVRC LVDVPGQKLP PIANGEMAKY 360
  361 LKTRVAPQVP TKVREAFITA VEKGNIRTMP NRSMPADPIP TPGALLLGDA FNMRHPLTGG 420
  421 GMTVALADIV VLRDLLRPIR NLNDKEALSK YIESFYTLRK PVASTINTLA DALYKVFLAS 480
  481 SDEARTEMRE ACFDYLSLGG VFSSGPVALL SGLNPRPLSL VLHFFAVAIY AVCRLMLPFP 540
  541 SIESFWLGAR IISSASSIIF PIIKAEGVRQ MFFPRTIPAI YRAPP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 4.522879 Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain
    2 View Details [118..585] PSI-BLAST 45.0 No description for 2qa1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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