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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERG15_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.18
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPFVIRNLP RFQSTLRSSL LYTNHRPSSR FSLSTRRFTT GATYIRRWKA TAAQTLKLSA  60
   61 VNSTVMMKPA KIALDQFIAS LFTFLLLYIL RRSSNKNKKN RGLVVSQNDT VSKNLETEVD 120
  121 SGTDVIIVGA GVAGSALAHT LGKEGRRVHV IERDFSEQDR IVGELLQPGG YLKLIELGLE 180
  181 DCVKKIDAQR VLGYVLFKDG KHTKLAYPLE TFDSDVAGRS FHNGRFVQRM REKALTLSNV 240
  241 RLEQGTVTSL LEEHGTIKGV RYRTKEGNEF RSFAPLTIVC DGCFSNLRRS LCKPKVDVPS 300
  301 TFVGLVLENC ELPFANHGHV VLGDPSPILM YPISSSEVRC LVDVPGQKLP PIANGEMAKY 360
  361 LKTRVAPQVP TKVREAFITA VEKGNIRTMP NRSMPADPIP TPGALLLGDA FNMRHPLTGG 420
  421 GMTVALADIV VLRDLLRPIR NLNDKEALSK YIESFYTLRK PVASTINTLA DALYKVFLAS 480
  481 SDEARTEMRE ACFDYLSLGG VFSSGPVALL SGLNPRPLSL VLHFFAVAIY AVCRLMLPFP 540
  541 SIESFWLGAR IISSASSIIF PIIKAEGVRQ MFFPRTIPAI YRAPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle