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Protein Overview: RP44A_ARATH

General Information:
Name(s) found: RP44A_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana GN=RRP44A PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 933 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: RNA binding [IEA][ISS]
    ribonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSKVFNKK TRGGRIQKQV REVYLRDDIY CGAFSCKSCD SSAARLSSSK IIVVDTNVVL  60
   61 HQIDLLENKA IDTVVVLSVV LDEVKNRNRS VYNRIRLLCS NPARQFYVFS NHVHKDTYVQ 120
  121 AMEKESANDH NDRAIRVATL WYQKHLGDTS QVLLVTNDRE NKRKATEEGI SAETIEAYVK 180
  181 SLGQPELLDL LAQPTNEDIT MEDADDSRPS KRKLIYQEHK PMSEITAGLH RGIYHQGKLR 240
  241 VNRFNPYEAY VGSESIGEEI IIYGRSNMNR AFDGDIVAVE LLPRDQWQDE KALSIAEEDD 300
  301 EEDDTVHLAP DNVDDAPRTS NLSHETSGDK NAAPVRPSGR VVGVIRRNWH SYCGSLEPMS 360
  361 LPAGSGGTAH ALFVSKDRRI PKIRINTRQL QNLLDMRIVV AVDSWDRQSR YPSGHYVRPI 420
  421 GKIGDKETET EVVLIENDVD YSPFSSQVLA CLPPLPWSVS SEDVSNPVRQ DLRHLLVFSV 480
  481 DPPGCKDIDD ALHCTSLPNG NFELGVHIAD VTNFVHPGTP LDDEASKRGT SVYLVERRID 540
  541 MLPKPLTEDI CSLRADVERL AFSVIWEMSP DAEIISTRFT KSIIKSSAAL SYIEAQARMD 600
  601 DSRLTDSLTT DLRNMNTLAK IMRQRRIDRG ALTLASAEVK FDIDPENHDP LNIGMYQILE 660
  661 ANQMVEEFML AANVSVAGQI LKLFPSCSLL RRHPTPTREM LEPLLRTAAA IGLTLDVSSS 720
  721 KALADSLDRA VGEDPYFNKL IRILATRCMT QAVYFCSGDL SPPEYHHYGL AAPLYTHFTS 780
  781 PIRRYADVFV HRLLAASLGI YKLPTVFQDR PQLTSVADNL NYRHRNAQMA GRASVELYVL 840
  841 IYFRTRPTDE EARVVKIRSN GFIVFVPKYG IEGPVYLTGK GEKGAGDWYV DEEKQKIVKM 900
  901 DGSLSYSVLQ TVKIHMEVVE PQPNRPKLQL TLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] MSA 1.128974 View MSA. No confident structure predictions are available.
    2 View Details [210..933] PSI-BLAST 167.0 No description for 2vnuD was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle