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Protein Overview: BPC1_ARATH

General Information:
Name(s) found: BPC1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42570649|ref|NP_973398.1| BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||H84430 hypothetical protein At2g01930 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|222424361|dbj|BAH20136.1| AT2G01930 [Arabidopsis thaliana] [NCBI NR]
  • gi|20465481|gb|AAM20200.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20198231|gb|AAM15473.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18391534|ref|NP_565279.1| BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|17528982|gb|AAL38701.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Protein BASIC PENTACYSTEINE1 OS=Arabidopsis thaliana GN=BPC1 PE=1 SV=1 [Swiss-Prot]
  • (Q9SKD0) Hypothetical protein (Expressed protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|17528982|gb|AAL38701.1| unknown protein [Arabidopsis thaliana]gi|20198231|gb|AAM15473.1| expressed protein [Arabidopsis thaliana]gi|25410944|pir||H84430 hypothetical protein At2g01930 [imported] - Arabidopsis th [nrdb_11152004_Chlamydomonas]
  • | Symbols: BPC1, BBR/BPC1, ATBPC1 | ATBPC1/BBR/BPC1/BPC1 (BASIC PENTACYSTEINE1); DNA binding / specific transcriptional repressor/ transcription factor | chr2:427357-428208 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • | Symbols: BPC1, BBR/BPC1, ATBPC1 | ATBPC1/BBR/BPC1/BPC1 (BASIC PENTACYSTEINE1) | chr2:427357-428208 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: BPC1, BBR, ATBPC1 | basic pentacysteine1 | chr2:427358-428209 REVERSE LENGTH=283 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription, DNA-dependent [IPI]
    Molecular Function: DNA binding [IDA][IPI]
    transcription factor activity [IPI]
    specific transcriptional repressor activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDGFRNWG YYEPAAASSF KGNLGLQLMS TIDRNTKPFL PGRESNLMIG SNGSYHSREQ  60
   61 DMNYSWINQP KDNKFFNMLP ISTPSYSNVL SETSGSNSIQ MIHQPVLNSS RFEENPIPPP 120
  121 APCEEQTGKK RKMRGSIATP TVPKAKKMRK PKEERDVTNN NVQQQQQRVK PVKKSVDLVI 180
  181 NGVSMDISGL PVPVCTCTGT PQQCYRWGCG GWQSACCTTN ISVYPLPMST KRRGARISGR 240
  241 KMSQGAFKKV LEKLSTEGYS FGNAIDLKSH WARHGTNKFV TIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] MSA 1.005993 View MSA. No confident structure predictions are available.
    2 View Details [81..149] deduced N/A No confident structure predictions are available.
    3 View Details [150..283] Pfam 96.366532 No description for PF06217.2 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle