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Protein Overview: gi|5902365, gi|2...

General Information:
Name(s) found: gi|5902365 [NCBI NR]
gi|25406628 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] [NCBI NR]
  • pir||B96832 hypothetical protein F18B13.15 [imported] - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 2359 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK  60
   61 WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM SSKKFRHDKR VYLGALKFVP 120
  121 HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR 180
  181 DRRHFKRMRF PPFDDEEPPL DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT 240
  241 KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP 300
  301 KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI 360
  361 MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD FALPEGVEPL LRDTQLYTDT 420
  421 TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN 480
  481 ELHHRPPKAQ KKKHLFRSLA ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH 540
  541 LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG 600
  601 LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW 660
  661 LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV ESHFDLELRA AVMHDVLDAM 720
  721 PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN 780
  781 RERIRRGATV DKTVCRKNLG RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL 840
  841 ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA 900
  901 LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP 960
  961 NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML QTKFEKFFEK IDLTMLNRLL1020
 1021 RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR1080
 1081 ASEIAGPPQM PNEFMTFWDT KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH1140
 1141 PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV1200
 1201 YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH1260
 1261 MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE ATVHTQELLD LLVKCENKIQ1320
 1321 TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG1380
 1381 MSHEEDQLIP NLYRYIQPWE SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI1440
 1441 PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ1500
 1501 ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL1560
 1561 WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI FRAHLWQKIH ESVVMDLCQV1620
 1621 LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA1680
 1681 SNKYWIDVQL RWGDYDSHDI ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG1740
 1741 NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI1800
 1801 IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL1860
 1861 AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL LDFPNIVIKG SELQLPFQAC1920
 1921 LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP1980
 1981 DKSVVTEPHH IWPSLTDDQW MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI2040
 2041 TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR2100
 2101 AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN2160
 2161 PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG WLHTQPNELP QLSPQDVTSH2220
 2221 SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY2280
 2281 EKVQMLLSDR FLGFYMVPES GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE2340
 2341 FSNMEEADIT EGDREDTFT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle