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Protein Overview: RMR1_ARATH

General Information:
Name(s) found: RMR1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6942147|gb|AAF32325.1|AF218807_1 ReMembR-H2 protein JR700 [Arabidopsis thaliana] [NCBI NR]
  • gi|15293205|gb|AAK93713.1| putative ReMembR-H2 protein JR700 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239276|ref|NP_201417.1| JR700; peptidase/ protein binding / zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|14334832|gb|AAK59594.1| putative ReMembR-H2 protein JR700 [Arabidopsis thaliana] [NCBI NR]
  • gi|10177131|dbj|BAB10421.1| ReMembR-H2 protein JR700 [Arabidopsis thaliana] [NCBI NR]
  • Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Arabidopsis thaliana GN=RMR1 PE=2 SV=1 [Swiss-Prot]
  • (Q9M622) ReMembR-H2 protein JR700 (Putative ReMembR-H2 protein) [athaliana3702.FASTAC.txt]
  • putative ReMembR-H2 protein JR700 [Arabidopsis thaliana]gi|14334832|gb|AAK59594.1| putative ReMembR-H2 protein JR700 [Arabidopsis thaliana]gi|10177131|dbj|BAB10421.1| ReMembR-H2 protein JR700 [Arabidopsis thaliana]gi|15239276|ref|NP_201417.1| protease- [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Protease-associated zinc finger (C3HC4-type RING finger) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATRMR1, JR700 | JR700 (Arabidopsis thaliana receptor homology region transmembrane domain ring H2 motif protein 1); peptidase/ protein binding / zinc ion binding | chr5:26462424-26464104 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ReMembR-H2 protein JR700 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ReMembR-H2 protein JR700 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • JR700; peptidase/ protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATRMR1, RMR1 | receptor homology region transmembrane domain ring H2 motif protein 1 | chr5:26445198-26446878 FORWARD LENGTH=310 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative ReMembR-H2 protein JR700 OS=Arabidopsis thaliana GN=RMR1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: extrinsic to vacuolar membrane [IDA]
    Biological Process: intracellular protein transport [IDA]
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]
    peptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVVSSCLL VAAPFLSSLL RVSLATVVLN SISASFADLP AKFDGSVTKN GICGALYVAD  60
   61 PLDGCSPLLH AAASNWTQHR TTKFALIIRG ECSFEDKLLN AQNSGFQAVI VYDNIDNEDL 120
  121 IVMKVNPQDI TVDAVFVSNV AGEILRKYAR GRDGECCLNP PDRGSAWTVL AISFFSLLLI 180
  181 VTFLLIAFFA PRHWTQWRGR HTRTIRLDAK LVHTLPCFTF TDSAHHKAGE TCAICLEDYR 240
  241 FGESLRLLPC QHAFHLNCID SWLTKWGTSC PVCKHDIRTE TMSSEVHKRE SPRTDTSTSR 300
  301 FAFAQSSQSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..310] PSI-BLAST 9.39794 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.434026084000615 bayes_pls_golite062009
  • protein binding
    		•  0.31534665043077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle