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Protein Overview: UBP21_ARATH

General Information:
Name(s) found: UBP21_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 732 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin-specific protease activity [ISS]
    ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEFSDPPPS NLSSSHKLTK PNQTLDESSP TAPIRDLVTN SLSLSSPIRQ IQALSPAKPD  60
   61 GSSSSPPDKT LNFNPEENRD VNPDESSSSP SDKTLIAPPA QISPVSNNNH LRITNTSDSY 120
  121 LYRPPRRYIE YESDDDELNK MEPTKPLQLS WWYPRIEPTG VGAGLYNSGN TCFIASVLQC 180
  181 FTHTVPLIDS LRSFMYGNPC NCGNEKFCVM QALRDHIELA LRSSGYGINI DRFRDNLTYF 240
  241 SSDFMINHQE DAHEFLQSFL DKLERCCLDP KNQLGSVSSQ DLNIVDNVFG GGLMSTLCCC 300
  301 NCNSVSNTFE PSLGWSLEIE DVNTLWKALE SFTCVEKLED QLTCDNCKEK VTKEKQLRFD 360
  361 KLPPVATFHL KRFTNDGVTM EKIFDHIEFP LELDLSPFMS SNHDPEVSTR YHLYAFVEHI 420
  421 GIRATFGHYS SYVRSAPETW HNFDDSKVTR ISEERVLSRP AYILFYAREG TPWFSSTFEQ 480
  481 LKTVFEATPL HFSPVSVLDN SYESVDNSSK ACNDSVGVSI PDVKWPDSCC QEPKEEVFHS 540
  541 AESSNNEDSS AMIDALGSPQ SEKPFAETSQ QTEPESCPTE NKAYIDKSEK PFAETSQPKE 600
  601 PKPFADRASI DAPLLKVQNQ DISPKRKAGE RATLGGPKLK YQKPNSHQKR QGTFQIQRAH 660
  661 LQTKKQEESR KTKRPLFRSN VAASAPDPKY KNHALSYLNR AQTPRARKLA NALSDSPTKK 720
  721 KKSSNMRRSI KL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..473] PSI-BLAST 61.522879 No description for 2gfoA was found.
    3 View Details [474..558] deduced N/A No confident structure predictions are available.
    4 View Details [559..732] MSA 7.284997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle