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Protein Overview: GCA2_ARATH

General Information:
Name(s) found: GCA2_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||D96513 unknown protein, 6976-8939 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21280965|gb|AAM44984.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15220153|ref|NP_175159.1| GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase [Arabidopsis thaliana] [NCBI NR]
  • gi|15028353|gb|AAK76653.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12325399|gb|AAG52641.1|AC079677_5 unknown protein; 6976-8939 [Arabidopsis thaliana] [NCBI NR]
  • Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA2 PE=1 SV=1 [Swiss-Prot]
  • (Q9C6B3) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|15028353|gb|AAK76653.1| unknown protein [Arabidopsis thaliana]gi|25405192|pir||D96513 unknown protein, 6976-8939 [imported] - Arabidopsis thalianagi|12325399|gb|AAG52641.1| unknown protein; 6976-8939 [Arabidopsi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Bacterial transferase hexapeptide repeat-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GAMMA CA2, APFI | APFI; carbonate dehydratase | chr1:17323824-17325787 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein; 6976-8939 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • APFI [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: APFI, GAMMA CA2 | gamma carbonic anhydrase 2 | chr1:17321384-17323347 REVERSE LENGTH=278 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrial respiratory chain complex I [IDA]
    mitochondrial membrane [IDA]
    respiratory chain complex I [IDA]
    mitochondrion [IDA]
    membrane [IDA]
    Biological Process: response to salt stress [IEP]
    regulation of oxygen and reactive oxygen species metabolic process [IMP]
    photorespiration [TAS]
    anther dehiscence [IMP]
    Molecular Function: carbonate dehydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF  60
   61 VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI QDNTLVHVAK TNISGKVLPT 120
  121 LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV 180
  181 WGGNPAKFMR KLTDEEIVYI SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE 240
  241 DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 33.0 X-ray crystal structure of putative acetyltransferase, product of BC4754 gene [Bacillus cereus]

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.59855937987599 bayes_pls_golite062009
  • transferase activity
    		•  1.3237300007392 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.886009567107207 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.876088267537604 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.870444687691191 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle