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Protein Overview: PTR25_ARATH

General Information:
Name(s) found: PTR25_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Protein NRT1/ PTR FAMILY 5.12 OS=Arabidopsis thaliana GN=NPF5.12 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    response to nematode [IEP]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSIGDNET GAIVSNENVE FSVDFRGNPS IRSSSGAWKS SGFTMCAEVA EKFAYFGIAS  60
   61 NLITYFTEAL GESTAVAASN VNLWLGTAAF LPLIWGSIAD SFLGRFRTIL LTSSFYIMGL 120
  121 GLLTFSATIP SLCNDQETRE SCVSQVKVII FFCALYLIAL GEGGFKVCLR AFGADQFDEQ 180
  181 DPNESKAKSS YFNWLYFAIS IGILTTRLVT NYVQENLSWA LGYAIPCLSM MLALFLFLLG 240
  241 IKTYRFSTGG EGRQGKKHDN PFVRIGRVFV AAARNRRQTP SDTCLLLPNE STKKFRFLDR 300
  301 AVISCDSYEV EEAKAVLSLI PIWLCSLVFG IVFAQSPTFF TKQGSTMDRS ISSTLQVPAA 360
  361 TLQCFISLAI LVFIPIYDRL FVPIARSITR KPAGITTLQR ISTGIFLSII SMVIAALVEM 420
  421 KRLKTARDHG LVDSPKATVP MSVCWLIPQY ILFGVSDVFT MVGLQEFFYG EVPPQLRSMG 480
  481 LALYLSIIGI GNFLSSFMVS VIEEATSQSG QVSWFSNNLN QAHLDYFYWL LACLSSLAFI 540
  541 FTVYFAKSYL YNSPK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] PSI-BLAST 5.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [250..555] FFAS03 1.62 No description for 2v8nA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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