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Protein Overview: CDA3_ARATH

General Information:
Name(s) found: CDA3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T09926 cytidine deaminase (EC 3.5.4.5) CDA3 - Arabidopsis thaliana [NCBI NR]
  • gi|7269862|emb|CAB79721.1| cytidine deaminase 3 (CDA3) [Arabidopsis thaliana] [NCBI NR]
  • gi|67633770|gb|AAY78809.1| putative cytidine deaminase/cytidine aminohydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|5123557|emb|CAB45323.1| cytidine deaminase 3 (CDA3) [Arabidopsis thaliana] [NCBI NR]
  • gi|4836448|gb|AAD30446.1|AF121877_6 DesF [Arabidopsis thaliana] [NCBI NR]
  • gi|15233630|ref|NP_194692.1| cytidine deaminase, putative / cytidine aminohydrolase, putative [Arabidopsis thaliana] [NCBI NR]
  • Cytidine deaminase 3 OS=Arabidopsis thaliana GN=CDA3 PE=2 SV=1 [Swiss-Prot]
  • (Q9S847) Cytidine deaminase 3 (CDA3) (EC 3.5.4.5) [athaliana3702.FASTAC.txt]
  • cytidine deaminase 3 (CDA3) [Arabidopsis thaliana]gi|5123557|emb|CAB45323.1| cytidine deaminase 3 (CDA3) [Arabidopsis thaliana]gi|4836448|gb|AAD30446.1| DesF [Arabidopsis thaliana]gi|7484887|pir||T09926 cytidine deaminase (EC 3.5.4.5) CDA3 - Arabidopsi [nrdb_11152004_Chlamydomonas]
  • | Symbols: | cytidine deaminase, putative / cytidine aminohydrolase, putative | chr4:14522575-14523246 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • cytidine deaminase 3 (CDA3) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DesF [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cytidine deaminase/ hydrolase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative cytidine deaminase/cytidine aminohydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Cytidine/deoxycytidylate deaminase family protein | chr4:14522569-14523240 FORWARD LENGTH=223 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Cytidine deaminase OS=Arabidopsis thaliana GN=T16L4.140 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 223 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cytidine metabolic process [IEA]
    cytidine deamination [ISS]
    Molecular Function: zinc ion binding [IEA]
    catalytic activity [IEA]
    cytidine deaminase activity [IEA][ISS]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQDQYKFVF TAKEAESEGV TEPMRLPNLI GKAMSLALAP ISKYKVGAVG RARSGRIYLG  60
   61 VNVELPGLPL HHSIHAEQFL VTNLALNSEK GLHLLAVTIS TDGNDFGAPC GNCRQFLMEI 120
  121 SKALNIKILL KSKYEAEGSF KSLRLLLPDR FSPDDVLPKG SPLLLEKRHN CLSLSGSAEE 180
  181 ICSSDCSHLK CKALAAANNS FSPYTNSPSG VALQDDDGNW YRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 50.39794 Two-domain cytidine deaminase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.177505784657 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle