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View Structure Prediction Details

Protein: CDA3_ARATH
Organism: Arabidopsis thaliana
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|3818577 - gi|3818577|gb|AAC69568.1| cytidine deaminase 3 [Arabidopsis thaliana]
301.0 [0..1] [223..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQDQYKFVF TAKEAESEGV TEPMRLPNLI GKAMSLALAP ISKYKVGAVG RARSGRIYLG  60
   61 VNVELPGLPL HHSIHAEQFL VTNLALNSEK GLHLLAVTIS TDGNDFGAPC GNCRQFLMEI 120
  121 SKALNIKILL KSKYEAEGSF KSLRLLLPDR FSPDDVLPKG SPLLLEKRHN CLSLSGSAEE 180
  181 ICSSDCSHLK CKALAAANNS FSPYTNSPSG VALQDDDGNW YRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.39794
Match: 1af2A
Description: Two-domain cytidine deaminase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.177505784657 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle