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Protein Overview: TOP6A_ARATH

General Information:
Name(s) found: TOP6A_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana GN=TOP6A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: epidermal cell fate specification [IMP]
    DNA topological change [ISS]
    DNA metabolic process [ISS]
    Molecular Function: ATP binding [ISS]
    DNA binding [ISS]
    identical protein binding [IPI]
    protein binding [IPI]
    DNA topoisomerase (ATP-hydrolyzing) activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKKKRKRS KDDEAEELPF KSILESDDVI TELLKSYISS SIKAAAGAGG ASSSSSKPLT  60
   61 LADLSLSSSC REVADLSLSS VQTEIETVIV QIARSILAGD GFSFSVPSRA ASNQLYVPEL 120
  121 DRIVLKDKST LRPFASVSSV RKTTITTRIL ALIHQLCLRN IHVTKRDLFY TDVKLFQDQT 180
  181 QSDAVLDDVS CMLGCTRSSL NVIAAEKGVV VGRLIFSDNG DMIDCTKMGM GGKAIPPNID 240
  241 RVGDMQSDAM FILLVEKDAA YMRLAEDRFY NRFPCIIVTA KGQPDVATRL FLRKMKMELK 300
  301 LPVLALVDSD PYGLKILSVY GCGSKNMSYD SANLTTPDIK WLGIRPSDLD KYKIPEQCRL 360
  361 PMTEQDIKTG KDMLEEDFVK KNPGWVEELN LMVKTKQKAE IQALSSFGFQ YLSEVYLPLK 420
  421 LQQQDWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..427] PSI-BLAST 98.69897 No description for 2q2eA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle