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View Structure Prediction Details

Protein: TOP6A_ARATH
Organism: Arabidopsis thaliana
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOP6A_ARATH.

Description E-value Query
Range
Subject
Range
gi|108707550, gi... - gi|50920579|ref|XP_470650.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|27476...
467.0 [0..4] [427..409]

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Predicted Domain #1
Region A:
Residues: [1-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKKKRKRS KDDEAEELPF KSILESDDVI TELLKSYISS SIKAAAGAGG ASSSSSKPLT  60
   61 LADLSLSSSC REVADLSLSS VQTEIETVIV QIARSILAGD GFSFSVPSRA ASNQLYVPEL 120
  121 DRIVLKDKST LRPFASVSSV RKTTITTRIL ALIHQLCLRN IHVTKRDLFY TDVKLFQDQT 180
  181 QSDAVLDDVS CMLGCTRSSL NVIAAEKGVV VGRLIFSDNG DMIDCTKMGM GGKAIPPNID 240
  241 RVGDMQSDAM FILLVEKDAA YMRLAEDRFY NRFPCIIVTA KGQPDVATRL FLRKMKMELK 300
  301 LPVLALVDSD PYGLKILSVY GCGSKNMSYD SANLTTPDIK WLGIRPSDLD KYKIPEQCRL 360
  361 PMTEQDIKTG KDMLEEDFVK KNPGWVEELN LMVKTKQKAE IQALSSFGFQ YLSEVYLPLK 420
  421 LQQQDWL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.69897
Match: 2q2eA
Description: No description for 2q2eA was found.

YRC Informatics Platform - Version 3.0
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