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Protein Overview: SMG7L_ARATH

General Information:
Name(s) found: SMG7L_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Protein SMG7L OS=Arabidopsis thaliana GN=SMG7L PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 880 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEANSADQKQ KPNFLVEVNN IEKQLWTLIH SKTILHTDVS ELYAKAGSTY EQIFKSNLQH  60
   61 EELQEVEFCL WKLHYKHIDE FRKGLKTNDH AKHMKAFKLF LSKAAEFYQN LISKVRGYYH 120
  121 RLSEESGEQK SRFLCHRFYI CLGDLQRYQE QYLKAHEHPN WSTAATYYLE AAKSWPDSGN 180
  181 PHNQLAVLAT YVSDELLALY HCVRSLAVKE PFPGASNNLL LLFEKNRSSP LQSLSTDAEF 240
  241 NYLNPSEKKV SVKERDLSKA KGELVAGIDL WPLVVRTTSF FFLKSSFDEF GRAFASTIRE 300
  301 LDAAFAADDR NLEAMLESYQ FMDTARKGPY KILQIVAVFI YIFHNLAEAN GSDIVKEEVK 360
  361 LTNLALTMVF IVMGRVVERC LKTTPLDSCP LLPALLVFLD YLPFLLDKVE EEEEECRFDE 420
  421 KSKSAISYFF GKLVDILNQL KVKDKNCPAK TLLALWEDHE LKSLAPLAPI HALLDFSSNM 480
  481 DLRESFDRGK ELRLQRIISS AIDITTRQKK GSQKWLFFDN QRTHFYTTSG ELQSNGELFH 540
  541 GNGEGRNRKC VTIGPVEIIP LENERSVPVE EEEVILLKPL VRCQSAPIYS SGIAAKPLSS 600
  601 DCTTSGNQTT TSNDSLRRTL SLIGSESFSF TQGLKDTDPQ HLHLEEGTVS GRPPSLSAWV 660
  661 VDKNKEKGRL GLSKPNGLGP IDETGPVSAF DSLSINSSTE HPASSYSPPT PSAPLLPEDA 720
  721 SWFHNDASTN KAESFYDQTR YMELPGIMKP YTNPPFVGIS SSEWLRRYRE SRNLGPAYSY 780
  781 QAQGTNNLRN FMAHGSSKFS LLARYGTPND SSQNSTFHPQ LYMEDHESRG EKLGNVQQST 840
  841 TNPYGFSDDP GPFLRFLREK EWLNENGQRL RGPPPAYMNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..505] PSI-BLAST 61.39794 Crystal structure of the N-terminal domain of human SMG7
    2 View Details [506..880] PSI-BLAST 5.0 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle