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Protein Overview: gi|7267478, gi|1...

General Information:
Name(s) found: gi|7446490 [NCBI NR]
gi|7267478 [NCBI NR]
gi|5731758 [NCBI NR]
gi|15236479 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T14191 extensin homolog T28D5.60 - Arabidopsis thaliana [NCBI NR]
  • gi|7267478|emb|CAB77962.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5731758|emb|CAB52559.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236479|ref|NP_192577.1| proline-rich extensin-like family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: plant-type cell wall organization [IEA]
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNPSNWPSL LMLVLAFYVV VVPTSAQCKY SPQSPPPQPY VYSPPLPSPY VYKSPPPSPY  60
   61 LYSSPPPPPY VYNSPPPPPP YIYNSPPRPP YVYKSPPPPP FVYSSPPPPT YIYNSPPPPP 120
  121 YVYKSVPRIT FIYSSPPPPP YVYNSAPRIP FIYSSPPPPP YVYNSAPRVL FIYSSPPPPP 180
  181 YVYNSPPPPP YVYESVPRIP FIYSSPPPPP YVYNSAPRIP FIYSSPPPPP YVYNSAPRVP 240
  241 FIYSSPPPPP YVYKSVPRIP FIYSSPPPPP YVYNSAPRIP FIYSSLPPPP YVYNSAPRVP 300
  301 FIYSSPPPPP YVYNSAPRIP FIYSSPPPHH MFTSLFLIFH HLQLSTTPSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] MSA 2.037992 View MSA. No confident structure predictions are available.
    2 View Details [159..350] MSA 2.037985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle