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View Structure Prediction Details

Protein: gi|7267478, gi|1...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7267478, gi|1....

Description E-value Query
Range
Subject
Range
PRP2_MEDTR - Repetitive proline-rich cell wall protein 2 OS=Medicago truncatula GN=PRP2 PE=2 SV=1
265.0 [0..9] [347..22]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNPSNWPSL LMLVLAFYVV VVPTSAQCKY SPQSPPPQPY VYSPPLPSPY VYKSPPPSPY  60
   61 LYSSPPPPPY VYNSPPPPPP YIYNSPPRPP YVYKSPPPPP FVYSSPPPPT YIYNSPPPPP 120
  121 YVYKSVPRIT FIYSSPPPPP YVYNSAPRIP FIYSSPPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPYVYNSAPR VLFIYSSPPP PPYVYNSPPP PPYVYESVPR IPFIYSSPPP PPYVYNSAPR  60
   61 IPFIYSSPPP PPYVYNSAPR VPFIYSSPPP PPYVYKSVPR IPFIYSSPPP PPYVYNSAPR 120
  121 IPFIYSSLPP PPYVYNSAPR VPFIYSSPPP PPYVYNSAPR IPFIYSSPPP HHMFTSLFLI 180
  181 FHHLQLSTTP SI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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