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Protein Overview: LRK41_ARATH

General Information:
Name(s) found: LRK41_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T02537 probable serine/threonine-specific protein kinase F13M22.21 (EC 2.7.1.-) - Arabidopsis thaliana [NCBI NR]
  • gi|3236253|gb|AAC23641.1| putative receptor-like protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|20259541|gb|AAM13890.1| putative receptor protein kinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15224347|ref|NP_181307.1| RLK (receptor lectin kinase); kinase [Arabidopsis thaliana] [NCBI NR]
  • L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=2 SV=1 [Swiss-Prot]
  • (O80939) Putative receptor-like protein kinase (Putative receptor protein kinase) [athaliana3702.FASTAC.txt]
  • putative receptor protein kinase [Arabidopsis thaliana]gi|3236253|gb|AAC23641.1| putative receptor-like protein kinase [Arabidopsis thaliana]gi|7446441|pir||T02537 probable serine/threonine-specific protein kinase F13M22.21 (EC 2.7.1.-) - Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Lectin protein kinase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RLK | RLK (RECEPTOR LECTIN KINASE); kinase | chr2:15822012-15824039 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative receptor-like protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative receptor protein kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: RLK | receptor lectin kinase | chr2:15814934-15816961 REVERSE LENGTH=675 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 675 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: response to salicylic acid stimulus [IEP]
    Molecular Function: kinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV  60
   61 QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL SGHGIAFVVA PNASLPYGNP 120
  121 SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE 180
  181 KGQFKNLTLI SRKPMQVWVD YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY 240
  241 VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF 300
  301 LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS 360
  361 VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS HRNLVPLLGY CRRRGELLLV 420
  421 YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL 480
  481 DGELNGRLGD FGLARLYDHG SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE 540
  541 VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC 600
  601 SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF 660
  661 TGGSSIADSQ LSGGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..319] PSI-BLAST 34.69897 Legume lectin
    2 View Details [320..675] PSI-BLAST 66.69897 No description for 2qkwB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.40096962515027 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.15398264148864 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.95513305822187 bayes_pls_golite062009
  • DNA binding
    		•  1.80079581406991 bayes_pls_golite062009
  • protein kinase activity
    		•  1.4419983524192 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.26100708632333 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.24960126056886 bayes_pls_golite062009
  • transcription factor activity
    		•  1.15427978494805 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.11332114395407 bayes_pls_golite062009
  • kinase activity
    		•  1.07853834372569 bayes_pls_golite062009
  • protein binding
    		•  0.757492117682468 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.643993919887593 bayes_pls_golite062009
  • transferase activity
    		•  0.634621009477606 bayes_pls_golite062009
  • transporter activity
    		•  0.360715183177839 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.136330331230722 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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