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Protein Overview: gi|13605875, gi|...

General Information:
Name(s) found: gi|9958063 [NCBI NR]
gi|25511627 [NCBI NR]
gi|21700901 [NCBI NR]
gi|18391499 [NCBI NR]
gi|13605875 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|9958063|gb|AAG09552.1|AC011810_11 Unknown Protein [Arabidopsis thaliana] [NCBI NR]
  • pir||F86267 T6J4.6 protein - Arabidopsis thaliana [NCBI NR]
  • gi|21700901|gb|AAM70574.1| At1g13300/T6J4_6 [Arabidopsis thaliana] [NCBI NR]
  • gi|18391499|ref|NP_563926.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|13605875|gb|AAK32923.1|AF367336_1 At1g13300/T6J4_6 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: primary root development [IMP]
    regulation of transcription [TAS]
    cellular response to phosphate starvation [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKKFSNMDY NQKRERCGQY IEALEEERRK IHVFQRELPL CLDLVTQAIE ACKRELPEMT  60
   61 TENMYGQPEC SEQTTGECGP VLEQFLTIKD SSTSNEEEDE EFDDEHGNHD PDNDSEDKNT 120
  121 KSDWLKSVQL WNQPDHPLLP KEERLQQETM TRDESMRKDP MVNGGEGRKR EAEKDGGGGR 180
  181 KQRRCWSSQL HRRFLNALQH LGGPHVATPK QIREFMKVDG LTNDEVKSHL QKYRLHTRRP 240
  241 RQTVPNNGNS QTQHFVVVGG LWVPQSDYST GKTTGGATTS STTTTTGIYG TMAAPPPPQW 300
  301 PSHSNYRPSI IVDEGSGSHS EGVVVRCSSP AMSSSTRNHY VKNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] deduced N/A No confident structure predictions are available.
    2 View Details [179..255] PSI-BLAST 17.69897 Arr10-B
    3 View Details [256..344] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle