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Protein Overview: CX6B1_ARATH

General Information:
Name(s) found: CX6B1_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana GN=COX6B-1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 191 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [ISS]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: response to salt stress [IEP]
    oxidation reduction [ISS]
    Molecular Function: cytochrome-c oxidase activity [ISS]
    copper ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAVNAQTP SLSEQYHLEK EVKQDTSAKP VEVKEVAPEV TTQAEEVKTE QAKEESPVEE  60
   61 AVSVVEEKSE SAPESTEVAS EAPAAAEDNA EETPAAAEEN NDENASEEVA EETPDEIKLE 120
  121 TAPADFRFPT TNQTRHCFTR YVEYHRCVAA KGDDAPECDK FAKFYRSLCP SEWVDRWNEQ 180
  181 RENGTFPGPL P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] PSI-BLAST 4.69897 Solution Structure of Choline Binding Protein A, Domain R2, the Major Adhesin of Streptococcus pneumoniae
    2 View Details [109..191] PSI-BLAST 32.09691 Cytochrome c oxidase subunit h

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  8.77230386960109 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  8.77230386960109 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  8.77230386960109 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  8.46183559370125 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.50321341105356 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.76266766775096 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  2.62061796927348 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.01112242780223 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.80272347269033 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.61931860759595 bayes_pls_golite062009
  • catalytic activity
    		•  0.287695754348243 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle