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Protein Overview: NP93A_ARATH

General Information:
Name(s) found: NP93A_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Nuclear pore complex protein NUP93A OS=Arabidopsis thaliana GN=NUP93A PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 861 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    Biological Process: transport [IEA]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANDQEMSGW TDLLHSSSKL LEQAAPSSQF PPLQRNLDQL EALSKKLKAK TLRNEAPSQS  60
   61 IAATRLLARE GINAEQLARD LKSFELKTTF EDVFPAEATS VEEYLQQVHE MAMVSAIQEA 120
  121 QKDNVRSFND YMMKVLEEDW RKEKRDFLQS LSRISMLPKT NMIDTSREAH AGQLVPVGSS 180
  181 PRVSSTPGKE LVALANIPIH EKKAYVYGEV VKKLNTSRER GMPFRPAMCF KDAYDTLGAE 240
  241 VTRGKSVNMQ KIWQLVQAIT GEDSAVRQGV SKRMALAIGA RHHLQHGHEK FIMDTIQTHP 300
  301 TQAALGGSVG NLQRIRAFLR IRLRDYGVLD FDSTDARRQP PVDTTWQQIY FCLRTGYYEE 360
  361 AREIARSTRS SQQFAPLLTE WITTDGMVAA ESAAIASEEC EKMLRMGDRL GRTAYDKKKL 420
  421 LLYTIISGSR RQIERILRDL STLFNTIEDF LWFKLSCIRD VTGGSSSVVL NDGLAPYSLD 480
  481 DLQAYLNKFE PSYYTKNGKD PLVYPYVLLL SVQLLPAIMH LSKEAGDGGY NIDAVHIAIS 540
  541 LVDHSVLSEG SGTGHKLSVM DSNAEASSMI RQYGSMFLHH GDLQMTVEYY AQAAATVGGG 600
  601 QLAWSGRSNV DQQRQRNLML KQLLTEILLR ERGIYFLLGA RGSGEEGQLG RFFPDSRLRQ 660
  661 QFLVEAAHQC QEAGLYDKSI ELQKRVGAFS AALETINKCL SEAICSLARG RLDGESRTSG 720
  721 LILAGNDILE TYKYYPEVSL QERERVMEQE TILRELEAIL SIHKLGRLGN HLDALREIAK 780
  781 LPFLHLDPRM PDATADVFQS ASPYFQTCVP DLLKVALTCL DNVPDTDGSI RAMRSKIAGF 840
  841 LASNTHRNWP RDLYEKVARS F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] MSA 2.038981 View MSA. No confident structure predictions are available.
    2 View Details [157..861] PSI-BLAST 158.0 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle