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Protein Overview: WRKY6_ARATH

General Information:
Name(s) found: WRKY6_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 553 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: negative regulation of transcription [IMP]
    regulation of transcription, DNA-dependent [ISS]
    response to chitin [IEP]
    cellular response to phosphate starvation [IMP]
    Molecular Function: transcription factor activity [IMP][ISS]
    protein binding [IPI]
    promoter binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP  60
   61 VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV CREDDEGFRV KKEEQDDRTD 120
  121 VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ 180
  181 VSNSYTSLQM HLVSLMQQQQ QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS 240
  241 SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV 300
  301 SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI 360
  361 TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM MNPTNLLARA VLPCSTSMAT 420
  421 ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH 480
  481 VIGQALYNQS KFSGLQFSGG SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING 540
  541 TNHHDGEGNN KNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] deduced N/A No confident structure predictions are available.
    2 View Details [127..197] MSA 1.074991 View MSA. No confident structure predictions are available.
    3 View Details [198..274] deduced N/A No confident structure predictions are available.
    4 View Details [275..369] PSI-BLAST 24.69897 Solution Structure of the C-terminal WRKY Domain of AtWRKY4
    5 View Details [370..436] FFAS03 0.987 Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
    6 View Details [437..553] FFAS03 1.0 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle