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Protein Overview: WRK62_ARATH

General Information:
Name(s) found: WRK62_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30679452|ref|NP_195810.2| WRKY62; transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|29839652|sp|Q9LZV6.2|WRK62_ARATH RecName: Full=Probable WRKY transcription factor 62; AltName: Full=WRKY DNA-binding protein 62 [NCBI NR]
  • gi|225898875|dbj|BAH30568.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • Probable WRKY transcription factor 62 OS=Arabidopsis thaliana GN=WRKY62 PE=1 SV=2 [Swiss-Prot]
  • (Q9LZV6) Probable WRKY transcription factor 62 (WRKY DNA-binding protein 62) [Swiss-Prot]
  • Probable WRKY transcription factor 62 (WRKY DNA-binding protein 62)gi|30679452|ref|NP_195810.2| WRKY family transcription factor [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable WRKY transcription factor 62 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATWRKY62, WRKY62 | WRKY62 (WRKY DNA-binding protein 62); transcription factor | chr5:351133-352010 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Probable WRKY transcription factor 62 (WRKY DNA-binding protein 62) [nr-271106-contam.fasta]
  • WRKY62; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: WRKY62, ATWRKY62 | WRKY DNA-binding protein 62 | chr5:351136-352013 REVERSE LENGTH=263 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    salicylic acid mediated signaling pathway [IMP]
    defense response to bacterium [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSCQQKAME KLLHGHGCAN QLLIMDQTES DSSMEREDLA KSVLHCFSDA LSILIDTNDH  60
   61 QDDQSNNSSP QDSSPVLESS RKPLHKRGRK TSMAESSDYH RHESSTPIYH DGFLWRKYGQ 120
  121 KQIKESEYQR SYYKCAYTKD QNCEAKKQVQ KIQHNPPLYS TTYFGQHICQ LHQAYATFPI 180
  181 DTSDFEEHEG SHMIRFGHPN ISFSSSTSNL RQHQNHQDRI KDEYMKPVIA EDWSPSQWMS 240
  241 SEVALAVEAF EFNPFWTSHD LSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] deduced N/A No confident structure predictions are available.
    2 View Details [89..183] PSI-BLAST 28.522879 Solution Structure of the C-terminal WRKY Domain of AtWRKY4
    3 View Details [184..263] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle