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Protein Overview: WRK60_ARATH

General Information:
Name(s) found: WRK60_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4559352|gb|AAD23013.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28416653|gb|AAO42857.1| At2g25000 [Arabidopsis thaliana] [NCBI NR]
  • pir||A84643 probable WRKY-type DNA binding protein [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20978792|sp|Q9SK33.1|WRK60_ARATH RecName: Full=Probable WRKY transcription factor 60; AltName: Full=WRKY DNA-binding protein 60 [NCBI NR]
  • gi|15224660|ref|NP_180072.1| WRKY60; transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|110735957|dbj|BAE99953.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana] [NCBI NR]
  • Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1 [Swiss-Prot]
  • (Q9SK33) Probable WRKY transcription factor 60 (WRKY DNA-binding protein 60) [Swiss-Prot]
  • At2g25000 [Arabidopsis thaliana]gi|4559352|gb|AAD23013.1| putative WRKY-type DNA binding protein [Arabidopsis thaliana]gi|20978792|sp|Q9SK33|WR60_ARATH Probable WRKY transcription factor 60 (WRKY DNA-binding protein 60)gi|25412269|pir||A84643 probable [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Probable WRKY transcription factor 60 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATWRKY60, WRKY60 | WRKY60 (WRKY DNA-BINDING PROTEIN 60); transcription factor | chr2:10636891-10638174 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g25000 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative WRKY-type DNA binding protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Probable WRKY transcription factor 60 (WRKY DNA-binding protein 60) [nr-271106-contam.fasta]
  • WRKY60; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: WRKY60, ATWRKY60 | WRKY DNA-binding protein 60 | chr2:10629812-10631095 FORWARD LENGTH=271 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    response to salicylic acid stimulus [IEP]
    regulation of defense response [IMP]
    defense response to fungus [IEP]
    defense response to bacterium [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYDPNTNPF DLHFSGKLPK REVSASASKV VEKKWLVKDE KRNMLQDEIN RVNSENKKLT  60
   61 EMLARVCEKY YALNNLMEEL QSRKSPESVN FQNKQLTGKR KQELDEFVSS PIGLSLGPIE 120
  121 NITNDKATVS TAYFAAEKSD TSLTVKDGYQ WRKYGQKITR DNPSPRAYFR CSFSPSCLVK 180
  181 KKVQRSAEDP SFLVATYEGT HNHTGPHASV SRTVKLDLVQ GGLEPVEEKK ERGTIQEVLV 240
  241 QQMASSLTKD PKFTAALATA ISGRLIEHSR T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..271] PSI-BLAST 29.0 Solution Structure of the C-terminal WRKY Domain of AtWRKY4


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle