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Protein Overview: VILI2_ARATH

General Information:
Name(s) found: VILI2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 976 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cytoskeleton organization [IEA][ISS]
    Molecular Function: protein binding [IPI]
    actin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKVLDPAF QGAGQKPGTE IWRIENFEAV PVPKSEHGKF YMGDTYIVLQ TTQNKGGAYL  60
   61 FDIHFWIGKD TSQDEAGTAA VKTVELDAVL GGRAVQHREI QGHESDKFLS YFKPCIIPLE 120
  121 GGVASGFKTV EEEVFETRLY TCKGKRAIRL KQVPFARSSL NHDDVFILDT EEKIYQFNGA 180
  181 NSNIQERAKA LEVVQYLKDK YHEGTCDVAI VDDGKLDTES DSGAFWVLFG GFAPIGRKVA 240
  241 NDDDIVPEST PPKLYCITDG KMEPIDGDLS KSMLENTKCY LLDCGAEIYI WVGRVTQVDE 300
  301 RKAASQSAEE FLASENRPKA THVTRVIQGY ESHSFKSNFD SWPSGSATPG NEEGRGKVAA 360
  361 LLKQQGVGLK GIAKSAPVNE DIPPLLESGG KLEVWYVNGK VKTPLPKEDI GKLYSGDCYL 420
  421 VLYTYHSGER KDEYFLSCWF GKKSIPEDQD TAIRLANTMS NSLKGRPVQG RIYEGKEPPQ 480
  481 FVALFQPMVV LKGGLSSGYK SSMGESESTD ETYTPESIAL VQVSGTGVHN NKAVQVETVA 540
  541 TSLNSYECFL LQSGTSMFLW HGNQSTHEQL ELATKVAEFL KPGITLKHAK EGTESSTFWF 600
  601 ALGGKQNFTS KKASSETIRD PHLFSFAFNR GKFQVEEIYN FAQDDLLTED IYFLDTHAEV 660
  661 FVWVGQCVEP KEKQTVFEIG QKYIDLAGSL EGLHPKVPIY KINEGNEPCF FTTYFSWDAT 720
  721 KAIVQGNSFQ KKASLLFGTH HVVEDKSNGG NQGLRQRAEA LAALNSAFNS SSNRPAYSSQ 780
  781 DRLNESHDGP RQRAEALAAL SSAFNSSSSS TKSPPPPRPV GTSQASQRAA AVAALSQVLV 840
  841 AENKKSPDTS PTRRSTSSNP ADDIPLTEAK DEEEASEVAG LEAKEEEEVS PAADETEAKQ 900
  901 ETEEQGDSEI QPSGATFTYE QLRAKSENPV TGIDFKRREA YLSEEEFQSV FGIEKEAFNN 960
  961 LPRWKQDLLK KKFDLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..727] PSI-BLAST 1000.0 No description for 2fghA was found.
    2 View Details [728..908] MSA 1.084992 View MSA. No confident structure predictions are available.
    3 View Details [909..976] PSI-BLAST 24.221849 Solution structure of the Villin headpiece domain of human actin-binding LIM protein homologue (KIAA0843 protein)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • actin binding
    		•  5.53385110100387 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  4.11554260532242 bayes_pls_golite062009
  • binding
    		•  2.42849959483419 bayes_pls_golite062009
  • protein binding
    		•  1.84182032292601 bayes_pls_golite062009
  • PDZ domain binding
    		•  0.351516306039841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle