| Protein: | VILI2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 976 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VILI2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1115.0 | [0..1] | [976..1] |
|
Region A: Residues: [1-727] |
1 11 21 31 41 51
| | | | | |
1 MSTKVLDPAF QGAGQKPGTE IWRIENFEAV PVPKSEHGKF YMGDTYIVLQ TTQNKGGAYL 60
61 FDIHFWIGKD TSQDEAGTAA VKTVELDAVL GGRAVQHREI QGHESDKFLS YFKPCIIPLE 120
121 GGVASGFKTV EEEVFETRLY TCKGKRAIRL KQVPFARSSL NHDDVFILDT EEKIYQFNGA 180
181 NSNIQERAKA LEVVQYLKDK YHEGTCDVAI VDDGKLDTES DSGAFWVLFG GFAPIGRKVA 240
241 NDDDIVPEST PPKLYCITDG KMEPIDGDLS KSMLENTKCY LLDCGAEIYI WVGRVTQVDE 300
301 RKAASQSAEE FLASENRPKA THVTRVIQGY ESHSFKSNFD SWPSGSATPG NEEGRGKVAA 360
361 LLKQQGVGLK GIAKSAPVNE DIPPLLESGG KLEVWYVNGK VKTPLPKEDI GKLYSGDCYL 420
421 VLYTYHSGER KDEYFLSCWF GKKSIPEDQD TAIRLANTMS NSLKGRPVQG RIYEGKEPPQ 480
481 FVALFQPMVV LKGGLSSGYK SSMGESESTD ETYTPESIAL VQVSGTGVHN NKAVQVETVA 540
541 TSLNSYECFL LQSGTSMFLW HGNQSTHEQL ELATKVAEFL KPGITLKHAK EGTESSTFWF 600
601 ALGGKQNFTS KKASSETIRD PHLFSFAFNR GKFQVEEIYN FAQDDLLTED IYFLDTHAEV 660
661 FVWVGQCVEP KEKQTVFEIG QKYIDLAGSL EGLHPKVPIY KINEGNEPCF FTTYFSWDAT 720
721 KAIVQGN
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 2fghA |
| Description: | No description for 2fghA was found. |
|
Region A: Residues: [728-908] |
1 11 21 31 41 51
| | | | | |
1 SFQKKASLLF GTHHVVEDKS NGGNQGLRQR AEALAALNSA FNSSSNRPAY SSQDRLNESH 60
61 DGPRQRAEAL AALSSAFNSS SSSTKSPPPP RPVGTSQASQ RAAAVAALSQ VLVAENKKSP 120
121 DTSPTRRSTS SNPADDIPLT EAKDEEEASE VAGLEAKEEE EVSPAADETE AKQETEEQGD 180
181 S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [909-976] |
1 11 21 31 41 51
| | | | | |
1 EIQPSGATFT YEQLRAKSEN PVTGIDFKRR EAYLSEEEFQ SVFGIEKEAF NNLPRWKQDL 60
61 LKKKFDLF
|
| Detection Method: | |
| Confidence: | 24.221849 |
| Match: | 1ujsA |
| Description: | Solution structure of the Villin headpiece domain of human actin-binding LIM protein homologue (KIAA0843 protein) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 5.53385110100387 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.11554260532242 | bayes_pls_golite062009 |
| binding | 2.42849959483419 | bayes_pls_golite062009 |
| protein binding | 1.84182032292601 | bayes_pls_golite062009 |
| PDZ domain binding | 0.351516306039841 | bayes_pls_golite062009 |
