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Protein Overview: TRPD_ARATH

General Information:
Name(s) found: TRPD_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA][ISS]
    chloroplast envelope [IDA]
    Biological Process: tryptophan biosynthetic process [IMP][ISS]
    Molecular Function: anthranilate phosphoribosyltransferase activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIAVATTSS IVSGIKLSGI LTSFNAVDDA SSSCGRSNLT GVRIFPTLSR RRFSSIGAVS  60
   61 PIRGDAQSSF SRSSFACSQN LGLSGGFSAA EALPPACANA SPSSIKSFNQ LIETLIDRVD 120
  121 LSETEAESSL EFLLNEANEA LISAFLVLLR AKGETYEEIV GLARAMMKHA RKVEGLVDAV 180
  181 DIVGTGGDGA NTVNISTGSS ILAAACGAKV AKQGNRSSSS ACGSADVLEA LGVVLDLGPE 240
  241 GIKRCVEEGG IGFMMSPMYH PAMKIVGPVR KKLKIKTVFN ILGPMLNPAR VSYAVVGVYH 300
  301 KDLVVKMAKA LQRFGMKRAL VVHSCGLDEM SPLGGGLVYD VTPEKIEEFS FDPLDFGIPR 360
  361 CTLEDLRGGG PDYNADVLRR VLSGESGAIA DSLILNAAAA LLVSNRVQTL AEGVTVAREV 420
  421 QSSGKAIKTL DSWINISNLA QKSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] PSI-BLAST 14.0 Anthranilate synthase GAT subunit, TrpG
    2 View Details [99..444] PSI-BLAST 88.221849 Anthranilate phosphoribosyltransferase (TrpD)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • anthranilate phosphoribosyltransferase activity
    		•  4.94723089078793 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.602719004527 bayes_pls_golite062009
  • catalytic activity
    		•  2.36226573018655 bayes_pls_golite062009
  • transferase activity
    		•  1.44341339379755 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.42809090251675 bayes_pls_golite062009
  • anthranilate synthase activity
    		•  0.23338579105964 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle