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Protein Overview: SYNC3_ARATH

General Information:
Name(s) found: SYNC3_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Asparagine--tRNA ligase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: tRNA aminoacylation for protein translation [IEA]
    asparaginyl-tRNA aminoacylation [IEA]
    aspartyl-tRNA aminoacylation [IEA]
    translation [IEA]
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]
    ATP binding [IEA]
    aminoacyl-tRNA ligase activity [IEA]
    asparagine-tRNA ligase activity [IEA]
    aspartate-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDEIVPPAN QLAADNLEND GSTVQKAQFS DRVLIRSILG GGAKLAGQKV RIGGWVKTGR  60
   61 QQGKGTFAFL EVNDGSCPAN LQVMVDSSLY DLSRLVATGT CVTVDGVLKI PPEGKGLKQS 120
  121 IELSVETVIA VGTVDPTTYP LPKTKLTPEF LRDVLHLRSR TNLISAVARI RNALAFATHS 180
  181 FFQEHSFLYI HTPIITTSDC EGAGEMFQVT TLINHTERVE QDLIDNPPPT EADVEAARLI 240
  241 VKERGEAVAQ LKVAKASKEE ITASVAQLSV AKASLAHVEE RLRLKPGLPK NDGKIDYSND 300
  301 FFGRQAFLTV SGQLQVETYA CALSSVYTFG PTFRAENSHT SRHLAEFWMV EPEIAFADIH 360
  361 DDMNCAEAYV KYMCKWLMDK CGDDMELMDK NVDEGCTKRL NMVAKASFKR VTYTEAIERL 420
  421 EKAVAQGKVV FDNKVEWGID LASEHERYLT EVEFDQKPII VYNYPKGIKA FYMRLNDDEK 480
  481 TVAAMDVLVP KVGELIGGSQ REERYDVIKQ RIEEMGLPME PYEWYLDLRR YGTVKHCGFG 540
  541 LGFERMIQFA TGIDNIRDVI PFPRYPGKAD L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..571] PSI-BLAST 145.0 Aspartyl-tRNA synthetase (AspRS); Prokaryotic AspRS, insert domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle