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Protein Overview: SYA_ARATH

General Information:
Name(s) found: SYA_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1003 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    mitochondrion [IDA]
    Biological Process: alanyl-tRNA aminoacylation [ISS]
    response to cadmium ion [IEP]
    Molecular Function: nucleotide binding [IEA]
    ligase activity, forming aminoacyl-tRNA and related compounds [IEA]
    nucleic acid binding [IEA]
    ATP binding [IEA]
    alanine-tRNA ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVKAASLL ISSTKPPSRV FYSSHLRRPF FSHFRFSSSS STSSSVAVMP GSEPSETQWP  60
   61 AKRVRDTYVD FFRGKGHKFW PSSPVVPHND PTLLFANAGM NQYKPIFLGT ADPNTELSKL 120
  121 SRACNTQKCI RAGGKHNDLD DVGKDTYHHT FFEMLGNWSF GDYFKKEAIE WAWELLTKVY 180
  181 GLPTDRIYAT YFGGDEKAGL QPDNEARDIW LKVLPSGRVL PFGCKDNFWE MGDTGPCGPC 240
  241 TEIHYDRIGN RDAASLVNND DPTCLEIWNL VFIQFNRESD GSLKPLPAKH VDTGMGFERL 300
  301 TSVLQNKMSN YDTDVFMPIF DDIQKATGAR PYSGKVGPED VDRVDMAYRV VADHIRTLSF 360
  361 AIADGSRPGN EGREYVLRRI LRRAVRYGKE ILKAEEGFFN GLVSSVIRVM GDVFTELKEH 420
  421 EKKITDIIKE EEASFCKTLA KGIEKFRKAG QAVQGNTLSG DDAFILWDTY GFPLDLTQLM 480
  481 AEERGLLVDV DGFNKAMEEA RERSRSAQNK QAGGAIVMDA DATSTLHKAG VSATDDSFKY 540
  541 IWFQDHESEL KAIYTGSTFL ESSAASDNVG LVLGSTSFYA EQGGQIFDTG LIEGSFGTFN 600
  601 VCNVQIFGGF VLHIGYLSKE TGEVSVGDKV ICKVDYERRK LIAPNHTCTH MLNYALKEVL 660
  661 GDHIDQKGSI VLPEKLRFDF SHGKPVDPED LRRIESIVNK QIKDELDVFS KEAVLSEAKR 720
  721 IKGLRAVFGE VYPDPVRVVS IGRKVEDLLA DPENNEWSLL SSEFCGGTHI TNTREAKAFA 780
  781 LLSEEGIAKG IRRVTAVTTE CAFDALNAAS LLEREVEDAS RAEGSALEKK VSALKSRVDA 840
  841 AIIPAAKKAD IRTKIASLQN EVRKAQKKIA EQNLKKSVKL ATEAAESAAS DGKTFCIIQL 900
  901 DVGLDAAAVR EAVSKVMEKK GMSIMVFSTD ESTNKAVVCA GVPEKSDQFK PLDVTEWLTT 960
  961 ALGPLKGRCG KGKGGLASGQ GTDASQVQAA LDMASSFASM KLN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..545] PSI-BLAST 178.0 The crystal structure of the catalytic fragment of the alanyl-tRNA synthetase
    2 View Details [546..920] PSI-BLAST 71.0 Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS)
    3 View Details [921..1003] MSA 3.40099 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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