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Protein Overview: SPE1_ARATH

General Information:
Name(s) found: SPE1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|4589977|gb|AAD26494.1| arginine decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|30794011|gb|AAP40453.1| putative arginine decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • pir||A84541 arginine decarboxylase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227223|ref|NP_179243.1| ADC1 (ARGININE DECARBOXYLASE 1); arginine decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|12643847|sp|Q9SI64.1|SPE1_ARATH RecName: Full=Arginine decarboxylase 1; Short=ARGDC 1; Short=ADC 1; Short=ADC-O [NCBI NR]
  • Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1 [Swiss-Prot]
  • (Q9SI64) Arginine decarboxylase 1 (EC 4.1.1.19) (ARGDC 1) (ADC 1) (ADC-O) [athaliana3702.FASTAC.txt]
  • putative arginine decarboxylase [Arabidopsis thaliana]gi|4589977|gb|AAD26494.1| arginine decarboxylase [Arabidopsis thaliana]gi|12643847|sp|Q9SI64|SPE1_ARATH Arginine decarboxylase 1 (ARGDC 1) (ADC 1) (ADC-O)gi|15227223|ref|NP_179243.1| arginine decarb [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Arginine decarboxylase 1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ARGDC1, ARGDC, SPE1, ADC1 | ADC1 (ARGININE DECARBOXYLASE 1) | chr2:7157878-7159986 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative arginine decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ADC1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • arginine decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Arginine decarboxylase 1 (ARGDC 1) (ADC 1) (ADC-O) [nr-271106-contam.fasta]
  • | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine decarboxylase 1 | chr2:7150796-7152904 REVERSE LENGTH=702 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 702 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to oxidative stress [IEP]
    response to cold [IMP]
    response to salt stress [IMP]
    seed development [IGI]
    Molecular Function: arginine decarboxylase activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALAFVDTP IDTFSSIFTP SSVSTAVVDG SCHWSPSLSS SLYRIDGWGA PYFAANSSGN  60
   61 ISVRPHGSNT LPHQDIDLMK VVKKVTDPSG LGLQLPLIVR FPDVLKNRLE CLQSAFDYAI 120
  121 QSQGYDSHYQ GVYPVKCNQD RFIIEDIVEF GSGFRFGLEA GSKPEILLAM SCLCKGNPEA 180
  181 FLVCNGFKDS EYISLALFGR KLELNTVIVL EQEEELDLVI DLSQKMNVRP VIGLRAKLRT 240
  241 KHSGHFGSTS GEKGKFGLTT VQILRVVRKL SQVGMLDCLQ LLHFHIGSQI PSTALLSDGV 300
  301 AEAAQLYCEL VRLGAHMKVI DIGGGLGIDY DGSKSGESDL SVAYSLEEYA AAVVASVRFV 360
  361 CDQKSVKHPV ICSESGRAIV SHHSVLIFEA VSAGQQHETP TDHQFMLEGY SEEVRGDYEN 420
  421 LYGAAMRGDR ESCLLYVDQL KQRCVEGFKE GSLGIEQLAG VDGLCEWVIK AIGASDPVLT 480
  481 YHVNLSVFTS IPDFWGIDQL FPIVPIHKLD QRPAARGILS DLTCDSDGKI NKFIGGESSL 540
  541 PLHEMDNNGC SGGRYYLGMF LGGAYEEALG GVHNLFGGPS VVRVLQSDGP HGFAVTRAVM 600
  601 GQSSADVLRA MQHEPELMFQ TLKHRAEEPR NNNNKACGDK GNDKLVVASC LAKSFNNMPY 660
  661 LSMETSTNAL TAAVNNLGVY YCDEAAAGGG GKGKDENWSY FG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..522] PSI-BLAST 83.221849 No description for 2p3eA was found.
    2 View Details [523..702] MSA 2.107949 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle