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Protein Overview: SNP33_ARATH

General Information:
Name(s) found: SNP33_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cell plate [IDA]
    plasma membrane [IDA][TAS]
    integral to membrane of membrane fraction [IDA]
    Biological Process: cellular membrane fusion [TAS]
    vesicle-mediated transport [TAS]
    response to other organism [IEP]
    cytokinesis by cell plate formation [IMP]
    response to mechanical stimulus [IEP]
    Molecular Function: protein binding [IPI]
    SNAP receptor activity [IPI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG  60
   61 ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE LEGYAVYKAE ETTKSVQGCL 120
  121 KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK 180
  181 TRPINGPVVT RDDSPTRRVN HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK 240
  241 QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 19.39794 Syntaxin 1A N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SNAP receptor activity
    		•  2.83778981988519 bayes_pls_golite062009
  • binding
    		•  2.13344290488739 bayes_pls_golite062009
  • SNARE binding
    		•  1.85060343142976 bayes_pls_golite062009
  • protein binding
    		•  1.51700626946713 bayes_pls_golite062009
  • transporter activity
    		•  0.487715383686856 bayes_pls_golite062009
  • protein transporter activity
    		•  0.268987748407298 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.0443963926233321 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle