| Protein: | SNP33_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNP33_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
155.0 | [0..1] | [300..1] |
|
Region A: Residues: [1-300] |
1 11 21 31 41 51
| | | | | |
1 MFGLRKSPAN LPKHNSVDLK SSKPNPFDSD DESDNKHTLN PSKRTTSEPS LADMTNPFGG 60
61 ERVQKGDSSS SKQSLFSNSK YQYKNNFRDS GGIENQSVQE LEGYAVYKAE ETTKSVQGCL 120
121 KVAEDIRSDA TRTLVMLHDQ GEQITRTHHK AVEIDHDLSR GEKLLGSLGG MFSKTWKPKK 180
181 TRPINGPVVT RDDSPTRRVN HLEKREKLGL NSAPRGQSRT REPLPESADA YQRVEMEKAK 240
241 QDDGLSDLSD ILGELKNMAV DMGSEIEKQN KGLDHLHDDV DELNFRVQQS NQRGRRLLGK 300
301
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNAP receptor activity | 2.83778981988519 | bayes_pls_golite062009 |
| binding | 2.13344290488739 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| protein binding | 1.51700626946713 | bayes_pls_golite062009 |
| transporter activity | 0.487715383686856 | bayes_pls_golite062009 |
| protein transporter activity | 0.268987748407298 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.0443963926233321 | bayes_pls_golite062009 |
