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Protein Overview: RPS5_ARATH

General Information:
Name(s) found: RPS5_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 889 amino acids

    Gene Ontology:
    Cellular Component: intracellular [ISS]
    Biological Process: defense response to bacterium, incompatible interaction [IDA]
    defense response [IMP][TAS]
    plant-type hypersensitive response [IMP]
    Molecular Function: nucleotide binding [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGCFSVSLP CDQVVSQFSQ LLCVRGSYIH NLSKNLASLQ KAMRMLKARQ YDVIRRLETE  60
   61 EFTGRQQRLS QVQVWLTSVL IIQNQFNDLL RSNEVELQRL CLCGFCSKDL KLSYRYGKRV 120
  121 IMMLKEVESL SSQGFFDVVS EATPFADVDE IPFQPTIVGQ EIMLEKAWNR LMEDGSGILG 180
  181 LYGMGGVGKT TLLTKINNKF SKIDDRFDVV IWVVVSRSST VRKIQRDIAE KVGLGGMEWS 240
  241 EKNDNQIAVD IHNVLRRRKF VLLLDDIWEK VNLKAVGVPY PSKDNGCKVA FTTRSRDVCG 300
  301 RMGVDDPMEV SCLQPEESWD LFQMKVGKNT LGSHPDIPGL ARKVARKCRG LPLALNVIGE 360
  361 AMACKRTVHE WCHAIDVLTS SAIDFSGMED EILHVLKYSY DNLNGELMKS CFLYCSLFPE 420
  421 DYLIDKEGLV DYWISEGFIN EKEGRERNIN QGYEIIGTLV RACLLLEEER NKSNVKMHDV 480
  481 VREMALWISS DLGKQKEKCI VRAGVGLREV PKVKDWNTVR KISLMNNEIE EIFDSHECAA 540
  541 LTTLFLQKND VVKISAEFFR CMPHLVVLDL SENQSLNELP EEISELASLR YFNLSYTCIH 600
  601 QLPVGLWTLK KLIHLNLEHM SSLGSILGIS NLWNLRTLGL RDSRLLLDMS LVKELQLLEH 660
  661 LEVITLDISS SLVAEPLLCS QRLVECIKEV DFKYLKEESV RVLTLPTMGN LRKLGIKRCG 720
  721 MREIKIERTT SSSSRNKSPT TPCFSNLSRV FIAKCHGLKD LTWLLFAPNL TFLEVGFSKE 780
  781 VEDIISEEKA EEHSATIVPF RKLETLHLFE LRGLKRIYAK ALHFPCLKVI HVEKCEKLRK 840
  841 LPLDSKSGIA GEELVIYYGE REWIERVEWE DQATQLRFLP SSRWRWRET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..133] MSA 1.771995 View MSA. No confident structure predictions are available.
    2 View Details [134..554] PSI-BLAST 14.045757 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [555..889] PSI-BLAST 13.0 Leucine rich effector protein YopM


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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