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Protein Overview: RL182_ARATH

General Information:
Name(s) found: RL182_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6714451|gb|AAF26138.1|AC011620_14 putative 60S ribosomal protein L18 [Arabidopsis thaliana] [NCBI NR]
  • gi|21431838|sp|P42791.2|RL182_ARATH RecName: Full=60S ribosomal protein L18-2 [NCBI NR]
  • gi|16974509|gb|AAL31164.1| AT3g05590/F18C1_14 [Arabidopsis thaliana] [NCBI NR]
  • gi|15230011|ref|NP_187210.1| RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|14335090|gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thaliana] [NCBI NR]
  • (P42791) 60S ribosomal protein L18 [Swiss-Prot]
  • 60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1 SV=2 [Swiss-Prot]
  • putative 60S ribosomal protein L18 [Arabidopsis thaliana]gi|16974509|gb|AAL31164.1| AT3g05590/F18C1_14 [Arabidopsis thaliana]gi|14335090|gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thaliana]gi|15230011|ref|NP_187210.1| 60S ribosomal protein L18 (RPL [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 60S ribosomal protein L18 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPL18 | RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome | chr3:1621517-1622781 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT3g05590/F18C1_14 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative 60S ribosomal protein L18 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 60S ribosomal protein L18-2 [nr-271106-contam.fasta]
  • | Symbols: RPL18 | ribosomal protein L18 | chr3:1621511-1622775 FORWARD LENGTH=187 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    large ribosomal subunit [IDA][ISS][TAS]
    cytosolic large ribosomal subunit [IDA]
    vacuole [IDA]
    plasma membrane [IDA]
    Biological Process: translation [ISS][TAS]
    Molecular Function: structural constituent of ribosome [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIDLIAGGK SKKTKRTAPK SDDVYLKLTV KLYRFLVRRT NSKFNGVILK RLFMSKVNKA  60
   61 PLSLSRLVEF MTGKEDKIAV LVGTITDDLR VHEIPAMKVT ALRFTERARA RIEKAGGECL 120
  121 TFDQLALRAP LGQNTVLLRG PKNSREAVKH FGPAPGVPHS HSKPYVRAKG RKFEKARGKR 180
  181 KSRGFKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] PSI-BLAST 38.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
    2 View Details [142..187] MSA 1.057979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle