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Protein Overview: RS132_ARATH

General Information:
Name(s) found: RS132_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6521012|dbj|BAA88058.1| cytoplasmic ribosomal protein S13 [Arabidopsis thaliana] [NCBI NR]
  • gi|30102866|gb|AAP21351.1| At4g00100 [Arabidopsis thaliana] [NCBI NR]
  • gi|27808638|sp|P59224.1|RS132_ARATH RecName: Full=40S ribosomal protein S13-2 [NCBI NR]
  • gi|21593617|gb|AAM65584.1| putative ribosomal protein S13 [Arabidopsis thaliana] [NCBI NR]
  • gi|18411224|ref|NP_567151.1| ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A); structural constituent of ribosome [Arabidopsis thaliana] [NCBI NR]
  • gi|15982874|gb|AAL09784.1| AT4g00100/F6N15_7 [Arabidopsis thaliana] [NCBI NR]
  • gi|13877541|gb|AAK43848.1|AF370471_1 similar to ribosomal protein S13 [Arabidopsis thaliana] [NCBI NR]
  • (P59224) 40S ribosomal protein S13-2 [Swiss-Prot]
  • 40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1 [Swiss-Prot]
  • At4g00100 [Arabidopsis thaliana]gi|21593617|gb|AAM65584.1| putative ribosomal protein S13 [Arabidopsis thaliana]gi|15982874|gb|AAL09784.1| AT4g00100/F6N15_7 [Arabidopsis thaliana]gi|13877541|gb|AAK43848.1| similar to ribosomal protein S13 [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 40S ribosomal protein S13-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: RPS13, PFL2, ATRPS13A | ATRPS13A (RIBOSOMAL PROTEIN S13A); structural constituent of ribosome | chr4:37172-38123 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative ribosomal protein S13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • cytoplasmic ribosomal protein S13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 40S ribosomal protein S13-2 [nr-271106-contam.fasta]
  • AT4g00100/F6N15_7 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At4g00100 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • similar to ribosomal protein S13 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATRPS13A (RIBOSOMAL PROTEIN S13A); structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal protein S13A | chr4:37172-38123 FORWARD LENGTH=151 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [IDA][ISS][NAS]
    membrane [IDA]
    nucleolus [IDA]
    Biological Process: cytokinesis by cell plate formation [IMP]
    trichome morphogenesis [IMP]
    leaf morphogenesis [IMP]
    translation [ISS][TAS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRMHSRGKG ISASALPYKR SSPSWLKTTS QDVDESICKF AKKGLTPSQI GVILRDSHGI  60
   61 PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK HLERNRKDKD SKFRLILVES 120
  121 RIHRLARYYK KTKKLPPVWK YESTTASTLV A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] Pfam 37.481486 No description for PF08069.3 was found. No confident structure predictions are available.
    2 View Details [62..151] PSI-BLAST 23.0 Localization and dynamic behavior of ribosomal protein L30e


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle