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Protein Overview: RS131_ARATH

General Information:
Name(s) found: RS131_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • 40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    cytosolic ribosome [IDA]
    cytosolic small ribosomal subunit [IDA][ISS]
    cell wall [IDA]
    nucleolus [IDA]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRMHSRGKG ISASALPYKR SSPSWLKTTP QDVDESICKF AKKGLTPSQI GVILRDSHGI  60
   61 PQVKSVTGSK ILRILKAHGL APEIPEDLYH LIKKAVAIRK HLERNRKDKD SKFRLILVES 120
  121 RIHRLARYYK KTKKLPPVWK YESTTASTLV A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] Pfam 37.886057 No description for PF08069.3 was found. No confident structure predictions are available.
    2 View Details [62..151] PSI-BLAST 22.69897 Localization and dynamic behavior of ribosomal protein L30e


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle