YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PYRD_ARATH

General Information:
Name(s) found: PYRD_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|26454657|sp|P32746.2|PYRD_ARATH RecName: Full=Dihydroorotate dehydrogenase, mitochondrial; Short=DHOdehase; AltName: Full=Dihydroorotate oxidase; Flags: Precursor [NCBI NR]
  • gi|24753785|gb|AAN64025.1|AF454729_1 dihydroorotate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|18420660|ref|NP_568428.1| PYRD (pyrimidine d); dihydroorotate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • gi|111074516|gb|ABH04631.1| At5g23300 [Arabidopsis thaliana] [NCBI NR]
  • gi|110736302|dbj|BAF00121.1| dihydroorotate dehydrogenase [Arabidopsis thaliana] [NCBI NR]
  • Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana GN=PYRD PE=1 SV=2 [Swiss-Prot]
  • (P32746) Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase) [athaliana3702.FASTAC.txt]
  • Dihydroorotate dehydrogenase, mitochondrial precursor (Dihydroorotate oxidase) (DHOdehase)gi|18420660|ref|NP_568428.1| dihydroorotate dehydrogenase, mitochondrial / dihydroorotate oxidase / DHOdehase (PYRD) [Arabidopsis thaliana]gi|24753785|gb|AAN64025. [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dihydroorotate dehydrogenase, mitochondrial precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PYRD | PYRD (PYRIMIDINE D); dihydroorotate dehydrogenase | chr5:7847795-7850246 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • PYRD; dihydroorotate dehydrogenase/ dihydroorotate oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • dihydroorotate dehydrogenase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Dihydroorotate dehydrogenase, mitochondrial precursor (Dihydroorotate oxidase) (DHOdehase) [nr-271106-contam.fasta]
  • At5g23300 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PYRD | pyrimidine d | chr5:7847792-7850243 REVERSE LENGTH=460 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDA]
    Biological Process: 'de novo' pyrimidine base biosynthetic process [ISS]
    pyrimidine ribonucleotide biosynthetic process [IDA][IGI]
    Molecular Function: dihydroorotate dehydrogenase activity [IDA][IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRAATSSA KWAREFLFRR VSSNPLGATR NCSSVPGASS APKVPHFSKR GRILTGATIG  60
   61 LAIAGGAYVS TADEATFCGW LFNATKVVNP FFALLDAEFA HKLAVSAAAR GWVPREKRPD 120
  121 PAILGLEVWG RKFSNPIGLA AGFDKNAEAT EGLLGMGFGF VEVGSVTPVP QEGNPKPRIF 180
  181 RLSQEGAIIN RCGFNSEGIV VVAKRLGAQH GKRMLAETSA TSSSPSDDVK PGGKSGPGIL 240
  241 GVNLGKNKTS EDAAADYVQG VHNLSQYADY LVINVSSPNT AGLRMLQGRK QLKDLVKKVQ 300
  301 AARDEMQWGD EGPPPLLVKI APDLSRGELE DIAAVALALH LDGLIISNTT VSRPDAVSNN 360
  361 PVATETGGLS GKPLFALSTN MLRDMYTLTR GKIPLIGCGG VSSGEDAYKK IRAGATLVQL 420
  421 YTGFAYGGPA LIPQIKEELV KCLERDGFKS IHEAIGADHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..460] PSI-BLAST 74.0 No description for 2fptA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.7385769437489 bayes_pls_golite062009
  • dihydroorotate dehydrogenase activity
    		•  2.73800716363956 bayes_pls_golite062009
  • dihydroorotate oxidase activity
    		•  2.35584458985229 bayes_pls_golite062009
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • dihydropyrimidine dehydrogenase (NADP+) activity
    		•  1.76080169529176 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  0.962937319088834 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.876786102965635 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.126127705865716 bayes_pls_golite062009
  • binding
    		•  0.100344139383616 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle