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Protein Overview: PYRB_ARATH

General Information:
Name(s) found: PYRB_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9294550|dbj|BAB02813.1| aspartate carbamoyltransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|51968378|dbj|BAD42881.1| aspartate carbamoyltransferase precursor [Arabidopsis thaliana] [NCBI NR]
  • gi|15231112|ref|NP_188668.1| aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) [Arabidopsis thaliana] [NCBI NR]
  • gi|14917032|sp|P49077.2|PYRB_ARATH RecName: Full=Aspartate carbamoyltransferase, chloroplastic; AltName: Full=Aspartate transcarbamylase; Short=ATCase; Flags: Precursor [NCBI NR]
  • Aspartate carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PYRB PE=2 SV=2 [Swiss-Prot]
  • (P49077) Aspartate carbamoyltransferase, chloroplast precursor (EC 2.1.3.2) (Aspartate transcarbamylase) (ATCase) [athaliana3702.FASTAC.txt]
  • aspartate carbamoyltransferase [Arabidopsis thaliana]gi|51968378|dbj|BAD42881.1| aspartate carbamoyltransferase precursor [Arabidopsis thaliana]gi|15231112|ref|NP_188668.1| aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCas [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aspartate carbamoyltransferase, chloroplast precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) | chr3:7090360-7091910 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • aspartate carbamoyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • amino acid binding / aspartate carbamoyltransferase/ carboxyl- and carbamoyltransferase/ ornithine carbamoyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Aspartate carbamoyltransferase, chloroplast precursor (Aspartate transcarbamylase) (ATCase) [nr-271106-contam.fasta]
  • aspartate carbamoyltransferase precursor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PYRB | PYRIMIDINE B | chr3:7090354-7091904 REVERSE LENGTH=390 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: pyrimidine ribonucleotide biosynthetic process [IGI]
    cellular amino acid metabolic process [ISS]
    cellular response to phosphate starvation [IEP]
    Molecular Function: aspartate carbamoyltransferase activity [IGI]
    protein binding [IPI]
    amino acid binding [ISS]
    carboxyl- or carbamoyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIASSLTSA TLCGASVFPK ALACSSEFPI NLPSPFESSK ICLTSFPASR DLKKNATLNL  60
   61 TRNVGPVRCH AMQAGTRELK KFELSDVIEG KQFDREMLSA IFDVAREMEK IEKSSSQSEI 120
  121 LKGYLMATLF YEPSTRTRLS FESAMKRLGG EVLTTENARE FSSAAKGETL EDTIRTVEGY 180
  181 SDIIVMRHFE SGAARKAAAT ANIPVINAGD GPGEHPTQAL LDVYTIQSEI GKLDGISVAL 240
  241 VGDLANGRTV RSLAYLLAKF KDVKIYFVSP EIVKMKDDIK DYLTSSGVEW EESSDLMEVA 300
  301 SKCDVVYQTR IQRERFGERL DLYEAARGKY IVDKDLLGVM QKKAIIMHPL PRLDEITADV 360
  361 DADPRAAYFR QAKNGLFIRM ALLKLLLVGW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..390] PSI-BLAST 107.0 Aspartate carbamoyltransferase catalytic subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ornithine carbamoyltransferase activity
    		•  6.04385935444669 bayes_pls_golite062009
  • carboxyl- or carbamoyltransferase activity
    		•  5.32518877756022 bayes_pls_golite062009
  • aspartate carbamoyltransferase activity
    		•  3.84118892938517 bayes_pls_golite062009
  • catalytic activity
    		•  2.06069688716378 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  1.85495044989817 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  1.84607164910918 bayes_pls_golite062009
  • transferase activity
    		•  1.58523544051826 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.54712264845123 bayes_pls_golite062009
  • dihydroorotase activity
    		•  0.585784960037124 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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