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Protein Overview: PEL14_ARATH, PL1...

General Information:
Name(s) found: PL14_ARATH [Swiss-Prot]
PEL14_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • (Q9SVQ6) Putative pectate lyase 14 precursor (EC 4.2.2.2) [Swiss-Prot]
  • Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: pectate lyase activity [ISS]
    lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVARTLFSI SATLIIFLAL FLHVNALSDG EWHEHAVKDP EEIAAMVDMS IRNSTYRRKL  60
   61 GFFSSCSTGN PIDDCWRCDK KWHRRRKRLA DCAIGFGRNA VGGRDGRYYI VTDPSDHDPV 120
  121 TPKPGTLRYA VIQDEPLWIV FKRDMVITLS QELIMNSFKT IDGRGVNVHI AGGACLTVQY 180
  181 VTNIIIHGIN IHDCKRTGNA MVRSSESHYG WRTMADGDGI SIFGSSHIWI DHNSLSSCAD 240
  241 GLIDAIMGST AITISNNYLT HHNEAILLGH TDSYTRDKMM QVTIAYNHFG EGLIQRMPRC 300
  301 RHGYFHVVNN DYTHWEMYAI GGSANPTINS QGNRFLAPGN RFAKEVTKRV GAGKGEWNNW 360
  361 NWRSQGDLML NGAYFTSSGA GASANYARAS SLAAKSSSLV GMLTSSSGAL KCRIGTLC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..418] PSI-BLAST 80.0 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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