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View Structure Prediction Details

Protein: PEL14_ARATH, PL1...
Organism: Arabidopsis thaliana
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEL14_ARATH, PL1....

Description E-value Query
Range
Subject
Range
PLY15_ARATH - Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1
457.0 [0..33] [418..81]

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Predicted Domain #1
Region A:
Residues: [1-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVARTLFSI SATLIIFLAL FLHVNALSDG EWHEHAVKDP EEIAAMVDMS IRNSTYRRKL  60
   61 GFFSSCSTGN PIDDCWRCDK KWHRRRKRLA DCAIGFGRNA VGGRDGRYYI VTDPSDHDPV 120
  121 TPKPGTLRYA VIQDEPLWIV FKRDMVITLS QELIMNSFKT IDGRGVNVHI AGGACLTVQY 180
  181 VTNIIIHGIN IHDCKRTGNA MVRSSESHYG WRTMADGDGI SIFGSSHIWI DHNSLSSCAD 240
  241 GLIDAIMGST AITISNNYLT HHNEAILLGH TDSYTRDKMM QVTIAYNHFG EGLIQRMPRC 300
  301 RHGYFHVVNN DYTHWEMYAI GGSANPTINS QGNRFLAPGN RFAKEVTKRV GAGKGEWNNW 360
  361 NWRSQGDLML NGAYFTSSGA GASANYARAS SLAAKSSSLV GMLTSSSGAL KCRIGTLC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.0
Match: 1pxzA
Description: 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142826098671881 bayes_pls_golite062009

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