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Protein Overview: PKS1_ARATH

General Information:
Name(s) found: PKS1_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Protein PHYTOCHROME KINASE SUBSTRATE 1 OS=Arabidopsis thaliana GN=PKS1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [NAS]
    plasma membrane [IDA]
    Biological Process: positive gravitropism [IMP]
    phototropism [IGI]
    red, far-red light phototransduction [IMP]
    response to far red light [IEP]
    red or far-red light signaling pathway [IMP]
    response to red light [IEP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLTPSSAS TPKTSFDFMK NNNSHSSLYV SSSSYLSSKE DALVTTKKLM EPSKTLNMSI  60
   61 NPKQEEFGDE KKMVKKAPED PEIGVFGAEK YFNGDMDSDQ GSSVLSLTNP EVERTVVDSK 120
  121 QSAKKSTGTP SVRSESSWNS QSVLLQNKLV NSCNSSFKEK KNSNGQIQKV TNNKKSFLAN 180
  181 LGCKCACSDG DSVDVEEKTS VKRSADPNIS VITMRSSADM NTELIKIQKQ EELSQRKSLE 240
  241 VFGSPVAIEK KSSVVQKKLP LPPWKSRTEE DDTKSEGSDS SSDLFEIEGL TGNPKPFLTR 300
  301 QGSDPASPTC YAPSEVSVEW SIVTASAADF SVMSECATSP VRRNRPTQIP RIPITAKSAP 360
  361 QRRKSSSSSG GNGFLMSCKS HKSVMVSGDL DRRSSMNKTQ PSYVPRFPME TTKPKSFETR 420
  421 RRISNSSISH TQSSLLYSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] deduced N/A No confident structure predictions are available.
    2 View Details [224..439] MSA 1.009969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle