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Protein Overview: PRN1_ARATH

General Information:
Name(s) found: PRN1_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to abscisic acid stimulus [IMP]
    response to low fluence blue light stimulus by blue low-fluence system [NAS]
    Molecular Function: calmodulin binding [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYENNSVPR IVIKKVLAKL EKEGEGAVVR NGITKIDQKL LDPFVLLVEF SFSLSAGFPD  60
   61 HPHRGFESVT YMLQGGIIHK DPKGHKGTIQ AGDVQWMTAG RGIIHSEFPE EEVNNGLQLW 120
  121 INLPSTEKMT EPKYKELSSL DIPRAEENGV EVKVIAGDSM GIKSPVYTRT PTMFLDFTLK 180
  181 PGSQTHQTVP ESWTAFAYII EGDEGVFGSL NSSAISAHHV VVFGPGDLVS VWNKSTSRSL 240
  241 RFLLIAGEPI GEPVVQCGPF VMNSQAEIDM AFDDYQNAKN GFEMAKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 95.045757 Crystal structure of human Pirin: a Bcl-3 and Nuclear factor I interacting protein and a cupin superfamily member

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.27132313313001 bayes_pls_golite062009
  • binding
    		•  2.06913005221547 bayes_pls_golite062009
  • DNA binding
    		•  1.65895851924037 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.63647328436787 bayes_pls_golite062009
  • transcription factor activity
    		•  1.01607426245072 bayes_pls_golite062009
  • protein binding
    		•  0.725572242652538 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle