YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PIP13_ARATH

General Information:
Name(s) found: PIP13_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 286 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [IDA][ISS]
    plasma membrane [IDA][TAS]
    Biological Process: water transport [IDA]
    transport [ISS]
    response to water deprivation [IEP]
    Molecular Function: water channel activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKEEDVRV GANKFPERQP IGTSAQTDKD YKEPPPAPFF EPGELSSWSF YRAGIAEFIA  60
   61 TFLFLYITVL TVMGVKRAPN MCASVGIQGI AWAFGGMIFA LVYCTAGISG GHINPAVTFG 120
  121 LFLARKLSLT RAVFYIVMQC LGAICGAGVV KGFQPNPYQT LGGGANTVAH GYTKGSGLGA 180
  181 EIIGTFVLVY TVFSATDAKR SARDSHVPIL APLPIGFAVF LVHLATIPIT GTGINPARSL 240
  241 GAAIIYNKDH AWDDHWIFWV GPFIGAALAA LYHQLVIRAI PFKSRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 74.0 Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle