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Protein Overview: PLY8_ARATH

General Information:
Name(s) found: PLY8_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 416 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: pectate lyase activity [ISS]
    lyase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTKLILFA SALLLTALFI GVNASRSNET WHEHAVENPD EVAAMVDMSI RNSTERRRLG  60
   61 YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG GRDGRFYVVT DPGDDDPVNP 120
  121 IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT 180
  181 NIIVHGIHVH DCKPTGNAMV RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL 240
  241 VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH 300
  301 GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW 360
  361 RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT MTSYSGALNC RAGRRC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] PSI-BLAST 73.045757 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.142826098671881 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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