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View Structure Prediction Details

Protein: PLY8_ARATH
Organism: Arabidopsis thaliana
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLY8_ARATH.

Description E-value Query
Range
Subject
Range
PLY15_ARATH - Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1
453.0 [0..1] [416..50]

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Predicted Domain #1
Region A:
Residues: [1-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTKLILFA SALLLTALFI GVNASRSNET WHEHAVENPD EVAAMVDMSI RNSTERRRLG  60
   61 YFSCATGNPI DDCWRCDRKW QLRRKRLADC SIGFGRNAIG GRDGRFYVVT DPGDDDPVNP 120
  121 IPGTLRHAVI QDEPLWIIFK RDMVITLKQE LIMNSFKTID GRGVNVHIAN GACLTIQYVT 180
  181 NIIVHGIHVH DCKPTGNAMV RSSPSHYGFR SMADGDAISI FGSSHIWIDH NSLSNCADGL 240
  241 VDAVMSSTAI TVSNNFFTHH NEVMLLGHSD SYTRDKVMQV TIAYNHFGEG LIQRMPRCRH 300
  301 GYFHVVNNDY THWEMYAIGG SAGPTINSQG NRFLAPVNPF AKEVTKREYT GESKWKHWNW 360
  361 RSEGDLFLNG AFFTRSGAGA GANYARASSL SAKSSSLVGT MTSYSGALNC RAGRRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.045757
Match: 1pxzA
Description: 1.7 Angstrom Crystal Structure of jun a 1, the major allergen from cedar pollen
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142826098671881 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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