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Protein Overview: PLDZ1_ARATH

General Information:
Name(s) found: PLDZ1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Phospholipase D zeta 1 OS=Arabidopsis thaliana GN=PLDZETA1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1096 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: root development [IGI]
    [NOT]cellular response to phosphate starvation [IEP]
    Molecular Function: phospholipase D activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP  60
   61 DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK KRAFIEEIHE KQEQVKEWLQ 120
  121 NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE 180
  181 YLNHFLGNLD IVNSREVCRF LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC 240
  241 GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE 300
  301 LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP 360
  361 RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW VCPELYLRRP FDPHTSSRLD 420
  421 NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS 480
  481 HHEKLVIVDN QVCFIGGLDL CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL 540
  541 KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM 600
  601 VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK 660
  661 ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP VAKRGSNAID SEWWETQDHD 720
  721 YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ 780
  781 FFISGLSGDD TVKNRVLEAL YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA 840
  841 IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI 900
  901 MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL 960
  961 WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ DVFSCVPNDL IHSRMAFRQS1020
 1021 LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR1080
 1081 PVFNESEYYA SPQVFH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..211] FFAS03 2.27 Crystal structure of the yeast PX-doamin protein Grd19p (sorting nexin3) complexed to phosphatidylinosytol-3-phosphate.
    2 View Details [212..275] deduced N/A No confident structure predictions are available.
    3 View Details [276..667] PSI-BLAST 22.522879 Phospholipase D
    4 View Details [668..969] FFAS03 4.41 Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF.
    5 View Details [970..1096] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.236280742130873 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.762303478549781 bayes_pls_golite062009
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.674770578390245 bayes_pls_golite062009
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle